NONHSAT013423
Revision as of 11:29, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT013423 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
465 nt |
Genomic location |
chr10+:54074817..54077802 |
Exon number |
4 |
Exons |
54074817..54074845,54076055..54076195,54076314..54076490,54077685..54077802 |
Genome context |
|
Sequence |
000001 GTGCTGCCCC GGGAATTACT GCAAAAATGG AATATGTGTG TCTTCTGATC AAAATCATTT CCGAGGAGAA ATTGAGGAAA 000080
000081 CCATCACTGA AAGCTTTGGT AATGATCATA GCACCTTGGA TGGGTATTCC AGAAGAACCA CCTTGTCTTC AAAAATGTAT 000160 000161 CACACCAAAG GACAAGAAGG TTCTGTTTGT CTCCGGTCAT CAGACTGTGC CTCAGGATTG TGTTGTGCTA GACACTTCTG 000240 000241 GTCCAAGATC TGTAAACCTG TCCTGAAAGA AGGTCAAGTG TGTACCAAGC ATAGGAGAAA AGGCTCTCAT GGACTAGAAA 000320 000321 TATTCCAGCG TTGTTACTGT GGAGAAGGTG AGTTTCATAT TTCAAGTTTT GTTTAACCTG AAATCTATTG ATTGGAATGA 000400 000401 GGATACGGAT ACAGTATTTT AAAGAAAACC CACAGGAATA AAATCTAAAT TTTCTTTGCA TTTGT |
Predicted Small Protein
Name | NONHSAT013423_smProtein_26:265 |
Length | 80 |
Molecular weight | 8804.5197 |
Aromaticity | 0.0379746835443 |
Instability index | 45.8582278481 |
Isoelectric point | 8.40899658203 |
Runs | 15 |
Runs residual | 0.0495925091035 |
Runs probability | 0.0498380733675 |
Amino acid sequence | MEYVCLLIKIISEEKLRKPSLKALVMIIAPWMGIPEEPPCLQKCITPKDKKVLFVSGHQT VPQDCVVLDTSGPRSVNLS |
Secondary structure | LEEEEEEEEEELHHHLLLLLHHHHHHHHLLLLLLLLLLLLLLLEELLLLLEEEEELLLLL LLLLEEEELLLLLLEELLL |
PRMN | - |
PiMo | - |