NONHSAT013423

From LncRNAWiki
Revision as of 11:29, 13 October 2014 by 73.162.128.239 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT013423

Source

NONCODE4.0

Same with

,

Classification

sense

Length

465 nt

Genomic location

chr10+:54074817..54077802

Exon number

4

Exons

54074817..54074845,54076055..54076195,54076314..54076490,54077685..54077802

Genome context

Sequence
000001 GTGCTGCCCC GGGAATTACT GCAAAAATGG AATATGTGTG TCTTCTGATC AAAATCATTT CCGAGGAGAA ATTGAGGAAA 000080
000081 CCATCACTGA AAGCTTTGGT AATGATCATA GCACCTTGGA TGGGTATTCC AGAAGAACCA CCTTGTCTTC AAAAATGTAT 000160
000161 CACACCAAAG GACAAGAAGG TTCTGTTTGT CTCCGGTCAT CAGACTGTGC CTCAGGATTG TGTTGTGCTA GACACTTCTG 000240
000241 GTCCAAGATC TGTAAACCTG TCCTGAAAGA AGGTCAAGTG TGTACCAAGC ATAGGAGAAA AGGCTCTCAT GGACTAGAAA 000320
000321 TATTCCAGCG TTGTTACTGT GGAGAAGGTG AGTTTCATAT TTCAAGTTTT GTTTAACCTG AAATCTATTG ATTGGAATGA 000400
000401 GGATACGGAT ACAGTATTTT AAAGAAAACC CACAGGAATA AAATCTAAAT TTTCTTTGCA TTTGT
[back to top]

Predicted Small Protein

Name NONHSAT013423_smProtein_26:265
Length 80
Molecular weight 8804.5197
Aromaticity 0.0379746835443
Instability index 45.8582278481
Isoelectric point 8.40899658203
Runs 15
Runs residual 0.0495925091035
Runs probability 0.0498380733675
Amino acid sequence MEYVCLLIKIISEEKLRKPSLKALVMIIAPWMGIPEEPPCLQKCITPKDKKVLFVSGHQT
VPQDCVVLDTSGPRSVNLS
Secondary structure LEEEEEEEEEELHHHLLLLLHHHHHHHHLLLLLLLLLLLLLLLEELLLLLEEEEELLLLL
LLLLEEEELLLLLLEELLL
PRMN -
PiMo -