NONHSAT067364
Revision as of 11:31, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT067364 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
866 nt |
Genomic location |
chr19-:51301961..51307132 |
Exon number |
5 |
Exons |
51301961..51302215,51302529..51302614,51305474..51305514,51305711..51305871,51306810..51307132 |
Genome context |
|
Sequence |
000001 GGTCCTTTAA GGTCTTGAAC ATCGGTTTCC TGACTTGAGC GGGGCCCATG CCCCTGCCGA GGAGGCTCAG CCTGGAAGCA 000080
000081 GCTAGCCCAT TTCCTATCTC CCCCACCACG ACCCCAGCAA GGATCTCTAC TTGACTTACC TCCTTCAGGC AACCACCTAG 000160 000161 AAAATCGTTG AGTTTGTTCA TGTCACAAGT GAAAGTATTT TTTCATGCAT TCATCGTTGG CACGTCGTCC TTTGGCAATA 000240 000241 TTAAAATCTA CCAACAAATG GGAAAAGTTA ACATTTGCAC CATCTTGCCA TATTCAAAAA CCTTGTGCTT AAGTGTTTTG 000320 000321 AAAagacagg gtttcaccat attggccagg ctggtctcga actcctgact tcgtgatctg cccacctcgg cttcccaaag 000400 000401 tgctgaggtt gcaggcgtga gccaccgtgc ccggccGCGT TTCCTACTCT TTAAGCTCTG TTAGCTTGGC CTCTGTCCCT 000480 000481 GAAGGTGCAG CTTCAAGCTT AGGACCACCC ACCATGCCTA TCCAGGTGCT GAAGGGCCTG ACCATCACTC ATTAAGAACA 000560 000561 GAGGAGGCTG CCTGTTACTC CTGGTGTTGG TGAGAAGGCA GATGTAGACA GCATCCCTCC AGACACTCTG CTGTTTCCTG 000640 000641 CCTAGGCGTG GCTGCAGCCA TGGCTAGGAA AGCGCTGCCA CCCACCCACC TGGGCCAGAG CTGGTTCTGC TCCTGCTGCA 000720 000721 GGGACACTGA GCTGGCTATC TCGGCGCTTC GGGCAAGAAC TGCAACAGGC TCTCCTGGGT CCTGCAGGTG TACAGCCGGG 000800 000801 CCCCTGCCTT GTGCCTCAGC TCTCGAGAGC TGCTGCTGCC GGGTGACCTG ATCCAACCTG ATAAGG |
Predicted Small Protein
Name | NONHSAT067364_smProtein_659:850 |
Length | 64 |
Molecular weight | 6575.6325 |
Aromaticity | 0.031746031746 |
Instability index | 58.5126984127 |
Isoelectric point | 8.69293212891 |
Runs | 7 |
Runs residual | 0.0338516358925 |
Runs probability | 0.0204784616549 |
Amino acid sequence | MARKALPPTHLGQSWFCSCCRDTELAISALRARTATGSPGSCRCTAGPLPCASALESCCC RVT |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHLLLLLLLLLLLLLLLLHHHHHHLLE ELL |
PRMN | - |
PiMo | - |