NONHSAT112878

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT112878

Source

NONCODE4.0

Same with

,

Classification

sense

Length

566 nt

Genomic location

chr6+:43188304..43189016

Exon number

2

Exons

43188304..43188337,43188485..43189016

Genome context

Sequence
000001 TGCCATCGTC TCCTCGCCAG AGGTCATCTC CAAGTATGAG AAGGCGCTCC TGCGTGGCTA TGTGGAGAGC TGCTCCAACC 000080
000081 TGACCTGGTG CACCAACCCC CAGGGCTGCG ACCGCATCCT GTGCCGCCAG GGCCTGGGCT GTGGGACCAC CTGCTCCAAG 000160
000161 TGTGGCTGGG CCTCTTGCTT CAACTGTAGC TTCCCTGAGG TGGGAGCCCC ACACTGGCCC TGACCCTGAG CAAGGATTCA 000240
000241 CACTCCTTCC CTGCTTAATA TCCCCACCCC GCCACACACA CAGACTGTGA CTTGTCCTTC CTCAGCCTCT GCCACCCAGT 000320
000321 TGAGCTCTGT TCCTCTTCCT GGAGCCCTCC AAATGTGATC TGTGCCTGCT CCCCTCTCTC CTGTGCACAC CAGCCATGCT 000400
000401 GCCCTCACGG CTCAGCTGTG TCCCCACCAT GCCCTCTTGC CTTAGGCACA CTACCCTGCT AGCTGTGGCC ATATGTCTCA 000480
000481 GTGGGTCGAC GACGGTGGCT ACTATGACGG CATGAGCGTG GAGGCGCAGA GCAAGCACCT GGCCAAGCTC ATCTCCAAGC 000560
000561 GCTGTC
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Predicted Small Protein

Name NONHSAT112878_smProtein_395:514
Length 40
Molecular weight 4035.8612
Aromaticity 0.0
Instability index 77.5692307692
Isoelectric point 8.71185302734
Runs 5
Runs residual 0.0405354449472
Runs probability 0.0510510510511
Amino acid sequence MLPSRLSCVPTMPSCLRHTTLLAVAICLSGSTTVATMTA
Secondary structure LLLLLLLLLLLLLLLHHHHHHHHHHHHLLLLLEEEEEEL
PRMN LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLL
PiMo iiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooo