NONHSAT132746
Revision as of 11:51, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT132746 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
550 nt |
Genomic location |
chr9-:86399709..86404020 |
Exon number |
2 |
Exons |
86399709..86399753,86403516..86404020 |
Genome context |
|
Sequence |
000001 TCTATATTCA TGAAATGGCA TATTGTGTTT AATAATGCTT ATTGAGTTAT TTTTTAGTAT TCTTATATTT TTGAGTAATA 000080
000081 ATCACTCATA ATTTTTAGTG TCCTAAACTG AATGTTGCCT TTGACATCTA TTATAGTGCC AATTATTTGG TAAGATTTTT 000160 000161 TTATTAAGGT AAAAAGTAAG ATTATATCAT ATATAATAGA TAACAATGAA GAGGAGAAAT GGAAATCTCA AAATTGGAAG 000240 000241 TTTGTATTTT GATGTCTTCT ATAGAATATA GGCTTCCTAG TTTGGCATGG TTAGATAACT TTGGAGAATC CATATTGTTT 000320 000321 TTTAACATAT TTGCTTTCTT TTCCTCTGTA TATAGTAATA TGTATGGTTA TTTTGCTCAT GTGATGTAAT GATACTGTCT 000400 000401 GTTTATTGTG AAACTTTTTT TTTGTAGCTG ACATCTGAAA TGTTTGAAGC AGATCTTGAG AAGGCATTGT TACTAAGTAA 000480 000481 ACTAGAATAT GAAGAGCACA AAAAGGAGTA TGAAGATGCT GAAAATACTT CAACTCAGTC CAAAGTTATG |
Predicted Small Protein
Name | NONHSAT132746_smProtein_218:388 |
Length | 57 |
Molecular weight | 6573.6065 |
Aromaticity | 0.214285714286 |
Instability index | 52.8464285714 |
Isoelectric point | 4.57110595703 |
Runs | 9 |
Runs residual | 0.00741608118657 |
Runs probability | 0.0152211034564 |
Amino acid sequence | MEISKLEVCILMSSIEYRLPSLAWLDNFGESILFFNIFAFFSSVYSNMYGYFAHVM |
Secondary structure | LLLLEEEEEEEELLHHHLLLHHHHHHLLLHHHHHHHHHHHHHHHHHHHHHHHHLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTToooooooo |