NONHSAT040096
Revision as of 12:24, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT040096 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
557 nt |
Genomic location |
chr14-:102718080..102771487 |
Exon number |
3 |
Exons |
102718080..102718332,102749815..102749929,102771299..102771487 |
Genome context |
|
Sequence |
000001 GCTAGGGTGA CAGGGACACA ACATGGCGGC GGGATCTCTA ACGCTCTCCT TCGAGGGACC ACCACGGAGA TCCTAGTGCG 000080
000081 GGACCCCGCC TCAGGGAAGT GGAAAGCAGG GGGACAACCT TCCTGCTTCT TTCTTTTCCG TCCAGTGTCG GCAAGGGGTT 000160 000161 GTCACCGGCT TCCGCATCCA AGATGAAGAA CTATAAAGCA ATTGGCAAAA TAGGAGAGGG AACGTTTTCT GAAGTTATGA 000240 000241 AGATGCAAAG CCTGAGAGAT GGAAACTACT ATGCATGTAA ACAAATGAAG CAGCGCTTTG AAAGGGAGAA GATACCCATT 000320 000321 ATCAGAAAAA AAAATTATGC ACTATATGTA CCAGTTATGT AAGTCCCTGG ATCATATTCA CAGGTATGCT CTCGGAGATT 000400 000401 TGACAGCTCT GAAATTAATA AAATGTGTTA ACATTCAGAT TCAAGAATTT GAATAAATGA AGTGTAATTC TATTTTTCCT 000480 000481 TTATACTGAA TGCAGAAATG GAATATTTCA CAGAGATGTA AAACCAGAAA ATATACTAAT AAAGGTAAGA GCTTTTA |
Predicted Small Protein
Name | NONHSAT040096_smProtein_182:361 |
Length | 60 |
Molecular weight | 7024.3081 |
Aromaticity | 0.118644067797 |
Instability index | 53.293220339 |
Isoelectric point | 9.88592529297 |
Runs | 9 |
Runs residual | 0.0080858342404 |
Runs probability | 0.0206382853442 |
Amino acid sequence | MKNYKAIGKIGEGTFSEVMKMQSLRDGNYYACKQMKQRFEREKIPIIRKKNYALYVPVM |
Secondary structure | LLLLLLLLLLLLLLHHHHHHHHHHLLLLHHHHHHHHHHHHHHLLLEEELLLEEEEEELL |
PRMN | - |
PiMo | - |