NONHSAT069978
Revision as of 12:25, 13 October 2014 by 73.162.128.239 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT069978 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
578 nt |
Genomic location |
chr2+:32727927..32730422 |
Exon number |
3 |
Exons |
32727927..32727958,32728109..32728303,32730072..32730422 |
Genome context |
|
Sequence |
000001 TAGTGATGCC TTGAAAGCAT TTCATGATAT GGGTGGTGTT CAGCTCATAT GCAATAATAT GGTTACTAGT ACAAGGGCTA 000080
000081 TTGTGAACAC TGCAAGAAGT ATGGTATCAA CTATTATGAA ATTTCTTGAC TCTGGTCCAA ATAAAGCTGT TGACAGCACA 000160 000161 TTGAAAACAA GAATACTAGC TTCTGAGCCT GACAATGCTG AAGGGATTCA TAACTTTGCA CCCCTCGGTA CAATCACATC 000240 000241 TAGCAGTCCT ACTGCCCAAC CAGCTGAAGT GCTATTGCAG GCCACACCTC CTCACAGAAG AGCTCGCTCT GCTGCTTGGT 000320 000321 CCTACATCTT TCTTCCAGAG GAGGCTTGGT GTGACCTTAC CATTCACCTT CCTGCAGCAG TGCTGCTTAA GGAGATACAT 000400 000401 ATCCAGCCTC ATCTTGCATC TCTTGCAAGT GAGTAATATT TTATAAAGAA GCATCATGAG AACAAGCTTT AATTTAGAAA 000480 000481 TATTTGAAAA TAAAAATGTT TAGTAAGCGG AAATACACTT AGGTGTGATT ACCAGAGAGT GTAACTTCTG AACAGTTTTT 000560 000561 ATTGAAATAA TTAATACT |
Predicted Small Protein
Name | NONHSAT069978_smProtein_194:445 |
Length | 84 |
Molecular weight | 9517.37 |
Aromaticity | 0.0843373493976 |
Instability index | 67.313253012 |
Isoelectric point | 9.49664306641 |
Runs | 13 |
Runs residual | 0.0165997322624 |
Runs probability | 0.0279646161999 |
Amino acid sequence | MLKGFITLHPSVQSHLAVLLPNQLKCYCRPHLLTEELALLLGPTSFFQRRLGVTLPFTFL QQCCLRRYISSLILHLLQVSNIL |
Secondary structure | LLLLEEELLLLHHHHHHHHLLLHHHHLLLLLLHHHHHHHHLLLLHHHHHHLLLLLLHHHH HHHHHHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |