NONHSAT115375
Revision as of 12:28, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT115375 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
649 nt |
Genomic location |
chr6+:144357755..144358841 |
Exon number |
3 |
Exons |
144357755..144358118,144358241..144358432,144358749..144358841 |
Genome context |
|
Sequence |
000001 ACATGTGTTT CTTATTCAGA ATAGCTTTTT GTTTTGTTTG TTTTAACTTG TGAGGCTTCT TCACTACTCA GGGACGAAAG 000080
000081 AAAGAGGAAA GAATGGAAAA AGTGAAACTA CAGAACAGAA ATTGTGCAAC TTCCAGAAAA CTGCTCTAAG ACAAGCAAGA 000160 000161 AGGCAGACCT GCTAAATGCC CATTATGACA CTATTTGACT AAACAGGTTT GAAATACTCT GGCATAAAAT GAAGGCCATC 000240 000241 CCCTAATGGT TTGTTCTTGG TGTTGGACAA ATCATAAAAG GACCAGACAT TGCTGTGATG AATTATATGC CCTGGAGAGA 000320 000321 GGCAGAAAGT GATTACACCA CCTTCATTTG CACATGGAAA GGAAGGCAAG AGTCCACCTG ATACAACACT GATTTTTGAG 000400 000401 ACTGAATTTT ATGCTGTGAC CAGAGGACCA CTGAACCATT TAAACAGAAA GACACCATGA CAGACAACTC TCTAAAACAG 000480 000481 AGCTAATCAC TACCTAAAAG AGAAGTTTTA AAAAGATGAG AAGCCATGTG ACAAGTCATA TCAGAATGCA GTTTTAGCAG 000560 000561 TTTTAGAAGA TATTTTAAAG AAAAATGATC ATGATGGTGA CAGTTTCATT TCTTTTAAGG AATACAATGC ATATCAACAT 000640 000641 TATGAACTA |
Predicted Small Protein
Name | NONHSAT115375_smProtein_245:331 |
Length | 29 |
Molecular weight | 3483.0204 |
Aromaticity | 0.107142857143 |
Instability index | 46.6464285714 |
Isoelectric point | 8.90728759766 |
Runs | 5 |
Runs residual | 0.0246478873239 |
Runs probability | 0.0424306659601 |
Amino acid sequence | MVCSWCWTNHKRTRHCCDELYALERGRK |
Secondary structure | LLLLEEELLLLLLHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |