NONHSAT017942
Revision as of 12:52, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT017942 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
855 nt |
Genomic location |
chr11-:9782514..9785209 |
Exon number |
2 |
Exons |
9782514..9782682,9784522..9785209 |
Genome context |
|
Sequence |
000001 TCTGTCTTAG TCAGTCTGAG CTGCTACAAC AGGACATCCA CAGACTGGGT GGCTTATAAT CAACAGAAAT GTATTTCTTG 000080
000081 CCGTTCTGAA GGTTGGAAAG TCCAAAATTA AGGCACTAAC AGATCTGGTG TCTGGTGAGG GTCTGCTTCC TGGCTCACAG 000160 000161 AGAACTAGCT ATCAACAATC CATGTTCACA TTCTGTCCAG CCACCTGTGC CTATCTATCT AATCTGATGT AGTCTAGTCT 000240 000241 ATCATCAGCC TAAATAGTCA TCATCCTAAA CATTCCTTTA TTTATGTTAC ATACATCTAC TCACTATCCT CACAACTCAT 000320 000321 TTATAATACA AAGGAATGTC TAAGTTCTGG TACCCACCAT ACCCACCTCC CCTTTCTAAG GAAAATGGAC ACAAACATTT 000400 000401 CTTTCTGCTT AAAGTTTCAG GATCATATCA TGTGTATTAA GTGAAATCAG TTCTATTTCT CTGGGCAGCA ACCCTGACTG 000480 000481 GACAAGGGGC AGGTTCTTGG GGTTCCTCAA CTAAAGGCAA CTGTGTTTGT ATGTGTATAA TCTTAACATA TATACACACA 000560 000561 CATATATATA TAGTAGCTTA TGTATTACAC ACATATATGA TATATTCTAT AGATATAGAT CTGTCAGACA TATGCGTACA 000640 000641 TATATAACTT CAATAGCTTG CCATAAAACT CTGCCCAAAT GAGGTTCTCC AACGTGCCTG ACTGATCATT TATACTTCTA 000720 000721 ATCATCTGTC TACAGATCAG TCCACTAGTC CATTCATCCC TATAAGCATC CATTCCTAGA GTCCACCCAT CACCCATCGA 000800 000801 TCCATATAAC CAACAACTAT CCATCCACAT GTTACCCTTT CATAACCTCC AGGTA |
Predicted Small Protein
Name | NONHSAT017942_smProtein_530:646 |
Length | 39 |
Molecular weight | 4513.3645 |
Aromaticity | 0.131578947368 |
Instability index | 44.5552631579 |
Isoelectric point | 5.54205322266 |
Runs | 10 |
Runs residual | 0.0905470914127 |
Runs probability | 0.0409468291821 |
Amino acid sequence | MCIILTYIHTHIYIVAYVLHTYMIYSIDIDLSDICVHI |
Secondary structure | LEEEEEHHHLLEEHHHHHHHHEEEEEEELLLLLLEEEL |
PRMN | LLHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL |
PiMo | i????????????????????????????????????? |