ENST00000324988.3
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000324988.3 |
Source |
Gencode19 |
Same with |
lnc-USP16-4:2 |
Classification |
intergenic |
Length |
607 nt |
Genomic location |
chr21+:29385682..29395552 |
Exon number |
2 |
Exons |
29385682..29385751,29395016..29395552 |
Genome context |
|
Sequence |
000001 CAGACATGTA TCTCATTATC TTCTGCAAAG ATCTATTTGT TTAGCCATGT GCAAATATTG CCCTAAAATG TTCACAGGTT 000080
000081 CCAGGATAAC CAGATGACTG AGGAATGTTG AAGATTGCAG TGATGGAAGT GTCTCAGTCA GCCTGGAAGA CTGTATGGAA 000160 000161 GGAGGTTGCC TGGCCACACT GTCATGTCCC CCTCTCCCTA AAAAAGGGAC ACATTTGCCT TTGTGCAAGG CAACACATAC 000240 000241 ATTTGGTCTG TGTATATACT TTGGTCTATG TATTCTGTTA TTTAACATTC TAATAATGTT GATGACCTTA AAATATGTTT 000320 000321 GACAATGATC CTTGTAAATC ATTATTATTC TGCCTTCTGC AAGATAAGAA TTATGGGCCA GGTATGGCAC TTAACGCCTA 000400 000401 TAATACAAAC ATTTTGGGAG GCCCAGGCAG GAGGATTGCT TGAGCTCAGG AGTTAGAGAC CAGCTTGGGC AACATAGTGA 000480 000481 GACCTCATCT CTACTAAAAA TAAAACAAAA AAAGTTATGA TAGTGACACT GCACTCCAGC CTGGGTGACA GAGCAAGATC 000560 000561 CTGTATCCAA ATAAATAAAT GCCTAATATA GGAATTATCA AATTCAA |
Predicted Small Protein
Name | ENST00000324988.3_smProtein_104:292 |
Length | 63 |
Molecular weight | 7259.7407 |
Aromaticity | 0.129032258065 |
Instability index | 42.2693548387 |
Isoelectric point | 8.95111083984 |
Runs | 8 |
Runs residual | 0.0246082949309 |
Runs probability | 0.0231849496555 |
Amino acid sequence | MLKIAVMEVSQSAWKTVWKEVAWPHCHVPLSLKKGHICLCARQHIHLVCVYTLVYVFCYL TF |
Secondary structure | LLEEEEEEHHHHHHHHHHHHHLLLLLLLLLLLLLLLEEEELLLEEEEEEEEEEEEEEEEE EL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHH LL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTT oo |