ENST00000359941.5
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000359941.5 |
Source |
Gencode19 |
Same with |
lnc-ABCB4-1:2 |
Classification |
intergenic |
Length |
855 nt |
Genomic location |
chr7-:86954541..86974831 |
Exon number |
3 |
Exons |
86954541..86954760,86970839..86971000,86974359..86974831 |
Genome context |
|
Sequence |
000001 GCCTGCGCGG TAGTGGGACC CGACCCTGTC TCCAGTGGGC GTCTTGGGCC CCGGCTCTAT TCTGGGCTGC GGGCCTGGGA 000080
000081 AGGGCTCGCC GGGTGCCAAA TGAGCTGTCC TAACTCTGCG GGGCTGCAGC TTCCTGCATG ATGCTGGGGA GCTTGGCGCC 000160 000161 TGACCCAGGA TCTAGAAGGC ACTCTGGGCA GGCCGCGCTC CGCCCACGAA GGTACCCAAC CCTCTGGGAT AGATGCAGGA 000240 000241 AGCGATGGTT AAGACCCATT TTCACCCAAC TTCTCGCCGC AGGTCTGGCT TACCACACGC TCCTCCCCAT TCCCAGTGAG 000320 000321 CCGCTTTTTG CAGCACCAGG CGAACACTTA CACCAGTGCT TTGTAAAGGA ATCTTATTGT CCACCCCGTG TCTTGGCAAA 000400 000401 AGAACAGTGA TCACACAGAT TCCTACTTGG GCTCTTTCCT TTAATCTTCG GAGGCTGAGT TTGCCCAACT CAGGTTTAAC 000480 000481 CACCAAGGAC TCTGAGAGCT GGCAGGTCTG AGTAACCCTG GTAACAATTC TCTTCACCTT ATCAAAACCT GAGCTAAAAC 000560 000561 CAATGCATCA GCTGATGATG ACAGCAGAGA GTGGCAGGGC TGAGGACCCA AAGTCATTTC CCAGGCTGGC GGAGAATAAA 000640 000641 CTGCCAGGGA GAAGAATGAG AAGACAGGAG ACAAACTGTT TGGAAAGCTA AATCTTCCCT CTTAATGAAT AAAGGTTTTT 000720 000721 GCCTTGTCTT AAAGTTTCTG AGTCCTAATT TTGGCAAAAT AAATAACTTA TGGTAATCTG GAATTGTATT TTGTAATATT 000800 000801 AAGTGTTTTG AACCTCTAAC ATTTACTTCC CAAAATCAAA CTTCAGTTTC AAAAT |
Predicted Small Protein
Name | ENST00000359941.5_smProtein_137:409 |
Length | 91 |
Molecular weight | 10274.9245 |
Aromaticity | 0.0888888888889 |
Instability index | 64.2511111111 |
Isoelectric point | 10.0413208008 |
Runs | 9 |
Runs residual | 0.0398589065256 |
Runs probability | 0.026928889674 |
Amino acid sequence | MMLGSLAPDPGSRRHSGQAALRPRRYPTLWDRCRKRWLRPIFTQLLAAGLAYHTLLPIPS EPLFAAPGEHLHQCFVKESYCPPRVLAKEQ |
Secondary structure | LLLLLLLLLLLLLLLLHHHLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLL LLLLLLLLLLHHHLEELLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |