ENST00000416401.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000416401.1 |
Source |
Gencode19 |
Same with |
lnc-NUF2-1:1,NONHSAT007253 |
Classification |
intronic(AS) |
Length |
469 nt |
Genomic location |
chr1+:163229640..163230449 |
Exon number |
2 |
Exons |
163229640..163229998,163230340..163230449 |
Genome context |
|
Sequence |
000001 GAGAGGACTG CAGGTGGAGA AGGAGGTACT GAGGTACTGA GGTACTGAGG TAACATACTG ACTGTATCCT CTTCCAGGAA 000080
000081 GGCAAGGTTC AGAAGTAAGA GCTGGAGAAA GAGGGCCACA TGCAAATTCC AAAATAGAAC CCTGAGGGCA CCCTCTAGAT 000160 000161 ATTCAAAATA TCCCCATGCT CCCCTATGAT CATAAGCAAT GATAATCCAT ATAAATCATT TCCATTTCCA GTGTTGTATG 000240 000241 TAATACAGGG ATATAGAATT CAGATTCAAA GCCTATGCTT TTTTCTCATG ATGCCATAAC ACTGCATGAG CCTTGAGTTT 000320 000321 GAAATTAATT TGGATTTGAA GTAATAAAAA TAAATTTAGG TATAATGTAC TCATTACCAT AATGTAATGG GTGCACTAAA 000400 000401 ATCTCAGAAT TCACCACTAT ATAATGTATT CATGTAACAA AAAAAACACT TGTACCTCAA AAGCTATTG |
Predicted Small Protein
Name | ENST00000416401.1_smProtein_185:298 |
Length | 38 |
Molecular weight | 4415.266 |
Aromaticity | 0.189189189189 |
Instability index | 45.8810810811 |
Isoelectric point | 7.91485595703 |
Runs | 7 |
Runs residual | 0.009422266303 |
Runs probability | 0.0309763545058 |
Amino acid sequence | MIISNDNPYKSFPFPVLYVIQGYRIQIQSLCFFLMMP |
Secondary structure | LEELLLLLLLLLLLLEEEEELLHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |