ENST00000422420.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000422420.1 |
Source |
Gencode19 |
Same with |
lnc-MTAP-1:17 |
Classification |
intergenic |
Length |
927 nt |
Genomic location |
chr9+:22113677..22121096 |
Exon number |
3 |
Exons |
22113677..22113798,22120199..22120409,22120503..22121096 |
Genome context |
|
Sequence |
000001 GACGTAAGAT CAAATGCAAT AGCATGTCAA ACAATGTGTA ACTCCAGTTA TACAAACATT ACTGTATCTC ATTGGGGATA 000080
000081 CGAAGCTCTA CACACTTGAA GATGGTGAAG GAATATAAAA ATTATCTTAC AGACAGCAAG TTGAACATTG TGGGATGCAT 000160 000161 GAGCTATTGA GGCCTTTGCA GCTTTCTGCT ACATGGAGGC TAGGGCCAGA GTCAAGATTT ATGCTTTGCA GCACACTGGT 000240 000241 CAGCTGTTTT TGCAAATCAG ATTAAATGAT TTTTAAATGA GGCTGAGAGC ATGGGAGATA CTAATGTGTG TTTCCTTGTG 000320 000321 AGCTACTGCA TAAGTTAGGA AATTGAAATA CAGAAAGATG AAAAGTGATT TGCCCAAGCA TATAGATCAA AGCTGTGGCA 000400 000401 GAACCAGGAC TGGAACCTAT ATCTCTCTAC TAATGGTTTT TTTAAAAAAA TAACCTTGTT TCAAAAATAT TAAAAAGTCA 000480 000481 CAAGAAAGGT AAACATGTGG ATAAACAAAA TGAAGAAAAT AAAAATTATC CAGTAATAAC ATATTGGCAT ATGTCTTTCT 000560 000561 GGTATATTTT CCTGTGTTGT CATCATTATC ATCTCCATCA TCATTATATC CATCATTATC ATCATCATCA TCATCATCAT 000640 000641 CATCATTATC ATCACCATAG TGAACATGTA ATGCTTACCT AGTGCCAGAT GCTGTCTAGG CATTTTACAT GTGTTACTGG 000720 000721 TAACTCATGT AATCCTCATA ACAACCTTAT AAGGTGGTTG CTATTATCCC CATGTTACAT ATGAAGAGAC AGAAGCATAA 000800 000801 AGAAGTTGCA CCGCTGGTAA TTGGCTGGGA TTTGAACTTA AGCAGTCTAA CCTTAGAGTA ATGATTTTAA CAACTATGCT 000880 000881 ATATACATAC AAATTTACAA AATAAAACTG GGCTCAGACA ATAAAAA |
Predicted Small Protein
Name | ENST00000422420.1_smProtein_101:169 |
Length | 23 |
Molecular weight | 2600.0379 |
Aromaticity | 0.136363636364 |
Instability index | 60.1772727273 |
Isoelectric point | 7.88275146484 |
Runs | 5 |
Runs residual | 0.00909090909091 |
Runs probability | 0.0349231584526 |
Amino acid sequence | MVKEYKNYLTDSKLNIVGCMSY |
Secondary structure | LHHHHHHHHLLLLLLEEEEEEL |
PRMN | - |
PiMo | - |