ENST00000423075.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000423075.1 |
Source |
Gencode19 |
Same with |
lnc-C9orf3-1:1,NONHSAT133356 |
Classification |
intronic(AS) |
Length |
529 nt |
Genomic location |
chr9+:97875990..97876743 |
Exon number |
2 |
Exons |
97875990..97876031,97876257..97876743 |
Genome context |
|
Sequence |
000001 CACCTCCTGG GTTCATGCCA TTCTCCTGCC TCAGCCTCCC GACTACTCAG GAGTCTGAGT GGGAGGATCA CCTAAGCGCA 000080
000081 GGAATTTGAG GCTACAGTGA GATGTGATCA TTCCACTGCA CTCCAGCCTG AAAGACAGAG CAAGACCTTA TCTCTAAAAA 000160 000161 TTTAAAACAA ACCAACCAAC CCAGAATTTA TATTAGAATA GATTTTCTCA TTTTAGAGAG ATTTATTAGA GAGAAGGAAA 000240 000241 AGCAAGCATT TAACATTCCA CCCTACTGTG TAGGAGTTTC AAATCTCCTT CCCTAGAGAG GTAGAGGGAA GACCACAGGA 000320 000321 CCCAAACAAG TGCCCTTTCC CTTCTGTGCG GCCAGGGAGG GGTTCCCAGC AGGTGGGTGC TGCTTTTTCC AAGGCCTCTT 000400 000401 CTTTTTATTG TTATGCCTGT ATATTTCAAA ATCTAAAACC AGACGTTAAT GTAGAAAACA TTTCGATACA GGTATTGGCA 000480 000481 CATGCATACA TGCGCATGCC TATTCATCCT GACCTGCTCC AAGCCATCC |
Predicted Small Protein
Name | ENST00000423075.1_smProtein_14:88 |
Length | 25 |
Molecular weight | 2678.9428 |
Aromaticity | 0.0833333333333 |
Instability index | 84.7083333333 |
Isoelectric point | 3.99725341797 |
Runs | 5 |
Runs residual | 0.0267857142857 |
Runs probability | 0.0468291821233 |
Amino acid sequence | MPFSCLSLPTTQESEWEDHLSAGI |
Secondary structure | LLEELLLLLLLLLLHHHHHHHLLL |
PRMN | - |
PiMo | - |