ENST00000527960.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000527960.1 |
Source |
Gencode19 |
Same with |
lnc-ALX4-4:3,NONHSAT018966 |
Classification |
intergenic |
Length |
547 nt |
Genomic location |
chr11-:43933997..43942444 |
Exon number |
2 |
Exons |
43933997..43934034,43941936..43942444 |
Genome context |
|
Sequence |
000001 ATAGGGCTAC TGAAACACAA GGTGACGAGA ACTATTAGGC AATTGAGTGC ATTCCCTGCA GGGCTGCTCC CACTTCTATC 000080
000081 TGACTTGGGT CTAGATGACT CAAGTGATTC CCGAGGGGAA AATAATCTAT GTGGAACAGC TGTCATGAGC AGGCCTTCTG 000160 000161 CTGCTCTTCA GCCTCAATTT CAGCCTGCTA CTTCCCGTGA CATCATTCAG TGATTCCTCC CTTTAAGGGG ACAGTTTTCT 000240 000241 CTTGTATTAC AGGTGACTAC TTGAAGGTGG CTAGACGAGA GCATACTGCC ACCACTCTTT ATTTGGAGGC CTGTAACCTG 000320 000321 TCTTGAGTGT GTTGCAGGAA GACTCAGTTA CAGTGTTCCC TGAATATGTA GCTTTCCATT ACAATAGTAT GCAAGCCAAG 000400 000401 ATGAAACCAC CTCTGTTTGG GTTTCAGCAG CTGTCTGCCT ACGGAAGGCT CCAGAGTCCC TGACGCATAT TTATATCTCC 000480 000481 ACTTCACTGA AGTCACAAGG AACAAACACG TTCACAGGAA GCACCTGGCA CACAGTAACT ATTATTA |
Predicted Small Protein
Name | ENST00000527960.1_smProtein_128:199 |
Length | 24 |
Molecular weight | 2572.8917 |
Aromaticity | 0.173913043478 |
Instability index | 87.5043478261 |
Isoelectric point | 5.22161865234 |
Runs | 6 |
Runs residual | 0.0331262939959 |
Runs probability | 0.0313696048991 |
Amino acid sequence | MWNSCHEQAFCCSSASISACYFP |
Secondary structure | LLLLHHHHHEEELLLLLLEEELL |
PRMN | - |
PiMo | - |