ENST00000546682.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000546682.1
Source	Gencode19
Same with	lnc-SNURF-3:4,NONHSAT041028
Classification	intergenic
Length	8842 nt
Genomic location	chr15+:25326301..25359074
Exon number	17
Exons	25326301..25326371,25327736..25327852,25328543..25328674,25330337..25330469,25332614..25332746,25334761..25335013,25336737..25336866,25338981..25339121,25342468..25342586,25343864..25343975,25344292..25344425,25349006..25351441,25352619..25352735,25353057..25353185,25354145..25354250,25354345..25354550,25354702..25359074
Genome context
Sequence	000001 GGAGATGGCA GGAAGCCCTG GACATACATG GTGTGGGGGC TCCTCCAGAG GCTGTTGGGA TCCTCCTGGA TGTGGTGTGG 000080 000081 GCATGGAAGG AAGGCCAGTG GAGACAATGG ATGATCTTGT TCTTAGCAGA TCACTGGATG TGGCAGGGAG TCCTAGGACA 000160 000161 TGTGTGGTGT GGGCTTCTTC AGGTGCTGGT GGTGTTGGCA TGAGGAAAGG AGGTATCTTC GAGGGACAAT CTTCTTCTTG 000240 000241 TGCGATCCTT GGAGATGCCA TGAGGCCCCT GGACACATGT GGTGTGGGCT CCTTTGGAGG CTGTTGTATC CCTTCTGAAT 000320 000321 GTGGCGTGGG CATAGAAGGA AGGCCAGTGG CCACGAGGGA CAATCTTGGT CTTGGGAGAT CCTGGAAATG ATAGGGAGTC 000400 000401 CCTTGATATG TGTGGCATGG GCTCCTTCAG GTGCTAGTGG ATTCCTTAGG ATGGTGGTGT TGGCATGAAA GGCAGGCTTG 000480 000481 TATCATGAGG AATGATTGTC ATCTTGTCTG ATTCTTGGAG ATGGCAGGAA GCCCCTGGAA ACACATGGTG TGGACTCTTT 000560 000561 CACAGGCTGT TGAAACCCTC CTGAATGTGA GGCCAGAGAC AGGCAGACAG CAGATGTATT GCAGGGAGCT GGATGACATG 000640 000641 GCCCTTGGAA CCTGTGCACA TGCCTGCCTT TCTGATGCAC GTCCATGTTT TCTCTGCACC TCCCCGGTGG TGTTGGTATA 000720 000721 AAAAGCAGGC TTACATCAGC AAGGGATGAT TGTCGTCTCA TGCGATCCTG GGAGATGGCA GAAGTCCCGG GACACATGGA 000800 000801 GTGTGGGCTC TTTCGGAGGC TGTTGGATCC CTCCTGAATG TGTTGTGGCC ATGGAAGTAA GGCCAGTGGC TACGAGGGAC 000880 000881 AGTCTTCATC TTGGGAGATC CCTAGAGAGG GCAGGGAGCC CCTTGACATG TGGAATGTGA TCTCTGTTGG GTGCTGGTGG 000960 000961 ATCCCACAGG TGGTCTGGCA TGGAAGAAGG CCAGAGGCTG CGATGGATCA TCTTTGTCTT GGGAGATTCC TGGAGATGGT 001040 001041 GGGGAGCCCC TGGGCACGTG CAGCATATGT GGCGTGGGCT TCTTCAGGTG CTGGTGGATC CCTCAGGATG TTCATTGTGG 001120 001121 AACCAGCACA GATTTTCATA CGAAAGTTAT TTCTTTTTAA CCTCAAAAAG TGACAGAATG GAGTGTATCA TGAAAAAGTC 001200 001201 TGACATCAAA ACCTCAAAAT GTGATATTGA TTGGGTGAGA TAGAATTCCA TGGAATTTCA TTGCCAAACC AGTGAAGTGC 001280 001281 TAATTTTGAC ATTTGTACCA GCTAACGTAG CTGTGAAGAA ACACACCAAT ACACTTCTAA GGACAGCATA GACCAAGATC 001360 001361 TAGGTTTCAT ATGGATGAAT TTATTCTTCC CTTTGAGGCA AGACAAGAAG GAAAGAAAGT ATTGGGAATA ATGCTGCCCT 001440 001441 CCCATCCTCA AGGGCCAGTG GGAACTCTAA TATTGATTGG TTTTCACAGA ATTCCATGGA CTTTAACTGC TGAACCAATG 001520 001521 ATGCACTGAT TTTGTCACTT GTACCAGCTA ACGCATCTGG GAGGCAACAA AACAATACTC TCCTGAGGTA ACATCGAATT 001600 001601 TTTAGTAAAT TCATTTTTGT GTGTTGTTTT TATTATTTTT TTAAGTAATT GAGAATTTCA TTAGGTGTGC AAGGAGTCAC 001680 001681 TTAATACAAA TAGTATTAGG CATTCAATAC TCTCATGAGA TATCTGAGCC TTCAGTTTCT TTTATTTTAA CATTTTACAT 001760 001761 TTTTCTCAAC TTTAACATCA GAAACATCCT ATAAGTGTAA TAAAATTCTT ATACTTTACA TATAGTTACA TAGTAAATCC 001840 001841 TCCTGTCTTA TTTAAGTTTG AAAAATGAAC ATGTATACTT CTCATTCCCA TGTATATAAT CTCTTCCCAC AGAATGAGGT 001920 001921 GGACCAAGAA ACTGGGCTTC ATACGGATGA ATTTATTTTT TTCCCTGTGT GGAGACATAA AGGAAAAGTA TAGTGAATAA 002000 002001 TTCCGCCTCC CACCCACAAG TCCCCATGGG AATTCTCACA TGTTAAAAAG CATTTTGTCC TGAAAATAAC AACAATTTTT 002080 002081 CTTAGGGAAT CAGGACACTC CAATGACAGT GAGACTCTGG CTATGCCAGG CAGCCATGGG CTGGTCATTG TGCTGCTGGT 002160 002161 CTCCATGATT GAATAGTGTG GGTCATTGGT GACAGATAGC TATGTGCTCA GTGTCTGCCA CATATCTCAG GTTCAAAGTC 002240 002241 CCTTTTATAA ATGTGCCTGG ATGGATGACG ACTTAAAAAT GAATCTCGTT GGAATCTGAG CAAAACGAGT GAGCAAACCA 002320 002321 CTTCTGTGCA GTTCTGTGAA CTGAGGTCAA GCACAGGGAC CATGCCAGGC AAACACGTGC AGAGAGTTCA GTTTGGTCAG 002400 002401 CAACTGGTAC CAAAATGGCC TGTGGTATTG GAAAACAAAC CCACTCACAT AGCTTACAGC ACATGAATTG TACAGAGGTC 002480 002481 TGTATGTGTT TGTATATATT TATATATGTT TGTGTACATA TATCTTTGGG GATTATATGG CATTTCTTTC AGTGTTTGGC 002560 002561 TGGCAGTGTC CATACTCTCA TAGTAAACAG AATTACACAA GAGTAGAGGG AACAGTAGGA AATGGTTTTG CCTACCCTAG 002640 002641 AGTCTTTTAT ACATGTTTTT AGGTGCTATA ATCTTGTGTG TGAGGTCAGT CTCTCAGGTT CATTAGATGG ACAGTGTAAA 002720 002721 AGGTATTATG AGGTTTTACA TATTATTTAT CTATTAAGTA AAAGAAATAT ATGGAAATTG AAGAGTAGCT TTTATCTATT 002800 002801 AAAGAAAAGA ATGTATGGAA ATTGAAGGGT ACTTTCTATT TGTGGAAAGT CTTAACATTT TAATTTCCTT ATTGATCTTG 002880 002881 TCACAGAAGT TGGAATTTAA GTTTTGCCTG TCACTCAAAG AGAAGCTTTT TAGACATTTG ATTAAGGGAT TCTAGTAGAT 002960 002961 GCTATAGTAA ACATTTCTAA TTGTAAAATG ATTAAATTTG CAATTCATAG AGTTTTATGT GGATTTCATT GCCTGATATT 003040 003041 CATTATTTTT ATTAGTGGGT TTCATAGATG TTTAAAGGGA GATCCTAGTT TTATTGTGTG ATACTAAGGG AGGCCTTTTG 003120 003121 GTCTTAGAAA ACTGACTTTC AGTACTACCC ATTTCCAGGG AGTGAGCATA ATTTTTATTC TCATACCACA TGGGCAAGTG 003200 003201 AATATCTATG GTTTATTTCT TATAACTCGT CATTAGTAAT TATGAAAGTA AGAAAGTTGA CAAATGAAAC TCTTTTAATT 003280 003281 ATGAGGGTTT CATTTGTCGA CTTCCTACTT CCTCAGTGTG CTTTGTGTAT TGGAGGTAAT ACTGGAATTG CATGGAATTC 003360 003361 CTACTGCTGC TCCAGTAACC TGCTGATTTT GTCACGTGTA CCAGATTCGT TGTCTGGCAA TGAGAACAAT ACACTTCAGA 003440 003441 GGTAATATTG CAATTTTTAG TAAGTGCATT TTTCCTGGGT TCGTTCTATT ATTTTATTTT AGCAAGTAAG ATTATAATTG 003520 003521 GTTTTTCAAG CAGTCTGTTA ATCCAAATGG TGTGAGGCCC TAATAATCTG GTTAGTCATC TGAAGTTTCT GTGTTCTTTG 003600 003601 TACAGTATTT TTATACTTCC TCTGTTTTCA AATAACATTA GGATACCCTA CTAGCAAAAT AATTTAGTAT ATTTTATATA 003680 003681 CTTGTGCATA GTAAGCCTGT TGTATATGTA CACTATTTGC ATGGTTGGCA AATTACATTT GCACTTTTTA TTTTTCTATA 003760 003761 ATTTTTTCCT ATTTTCAAAG GTTAATGTGG ACCAAAAACT AGATTTCATA TAAAAGAGTT TATTCCTTCT ACTTGAGGTG 003840 003841 TGACATGAAG GAAAGTAATG GAAATAATTC TGCCCTCCCA TTCTCAAGGG CCAGGGGGAA TTCAAATATT GAACGGAAGT 003920 003921 GATTTTGGAA TTGCATGGAA TTCTCACTGC CATCCCAAAG AAATGCTGAT CTTGTCACTC TTACCTGTTT CATTCCCTGG 004000 004001 GGGCAGAACA AAAGGACGCA CTCCAAAGAT CGGCATGAAC CAAGAACTGG GTTTCATATA AAATATTTTA TTCTGTCCTC 004080 004081 TTGAGATGTG ACATGAGAAA AGTATTGAGA ATACTTCTAT CACCTCATCT TCAAGAATCC GTAGGAATTC TCCCATGGTG 004160 004161 GACTTTACGG TTAACCTGAA CAGGTCTTGG AAAAAGGACT TTAAACATTC TCCTGTTCTG TGGAATAAGT ATACTTTTTT 004240 004241 CTGGACATAC ACCTTGTCAG TGAGTTCCAT GTGATACTAG AGTTGCATAG ATTTTTAACC TTTACGCCAA TGAAGATCTG 004320 004321 AGGCAAACAT TGCCCCTTTT TTAGAAGTTT GCATTTGTCA CTGATAACTG TAATAATTGA TCTTGTTGAA AAGCCTGGGA 004400 004401 AATGAAGATC TGATATGTCA CTTTTACCGG CTTCCTCAAC TGAAAAAGAA TACAATGAAA CACGCTGAGA ATTTTTGTGC 004480 004481 TTTCTCAGTC TTGCTGATGA TCTTTCTATG GGCCTGAAGC GTGGAGAGTG CCAGAGAGGC TGATCCTCAG CAGTGTGGCA 004560 004561 GAGGAAAGTT GGGTGCGACT AAGGGGTATG CGGTGCCCAC ATGCCACTGG GTCCTCAGCA GTACCACCTG GTGAGCGTCA 004640 004641 CTCTTGAGAG CTGAGAGTAG GTGGGAAGCA GCTCATGGTG AGAGGGTTCA GAGGCCGCCT TTCCCTCTCT GCGCACTGCC 004720 004721 CAGTTCTTCT AGTCACATGT CCCGGGACAG TACCATACCT GTGTGTGTCC TGCCTGCATT GCTGTGACCA CTTTTAGTGG 004800 004801 AATCAGGTGC AGTGCAGCTC TGCAGCTTCT GCAAATTGCC ACGCTCCCAC TCTCAAGCAG GTTGAGTGCT ACGAGTGATT 004880 004881 TTTAGACCAT TTGTTTATTC CCTTATCATG GCTTTTTGTG ACTTCTTCCT CCCCAGTCCG TTGGGTCACC TTTAAAGGTA 004960 004961 AAGTAATCCT GAGGTGGTTG AATTTACGGA AATGCTATGC ATTATTGTGA ATGGGATGTT CACCGGGCCA ACATCTTCTT 005040 005041 GGAACTTTGA GCAAACTGAT AGTCTGGTTG CACATTTGAT TTGTCTGGCA GTAAATGTTG GACAGTATTT GGACTGATGG 005120 005121 AAGCTAGAGA CAAACACATT GACTATTGTT GAATAACACT GGAAACATCT TAGGAGAGCA GTACATTAGC TAATTTAATA 005200 005201 GGTACATAAA CTGAATCCCA CTGTCTTGTG CTTGACGGAC CAGCAGACAC ATATGCTTGT ATCGTTCTCA TGTTTCTACA 005280 005281 TGTTTACCCT ATTCCCACAG GTCAACAAAG ACAAGGCACC TAGCCCCACA TGAAACTTTA TTCCTTTCCC TTTTGAGATG 005360 005361 TGACATGAAA GAAAATAACA GAAATGATTT TTCCATCCCA TCCTCAGGGA CCAGTGGGAA TGAATTTTAC CATCCCACCC 005440 005441 TCAAGGGCCA GGTCAGGTCG CTAAGCATTT TGTCACTAAA ATATTGCCCT TTTTTAGGGA TTATGTAATA CTCTATAAGG 005520 005521 CACTGTCTGT GCTGGGCAGC ATGGAGCCTG GGTCATTGCT GTGTTGGGGG CTTGGTCTCC ATGACTTAAT AGGGTGTATC 005600 005601 AGTGTGTCCC AGAGAAGTGT ACTCCAGAGT GCTCATTTTC TTTCATGTTT CTGAAGCAAA CAGTGCCCCC TTTTTTAGAA 005680 005681 GTTTGCATGT GTCACTGATA ACTTTAATAA TTGATCTTGT TGAAAAACCT GGGAAAACAG TGAGTTAAAT AATAACTTCT 005760 005761 CTGAACATGA GGTCCAGCCC AATTACCTGC CCTAAGCAAA CTATATGGAA GGAGAGTTCA GTTTGTTCAG CTATGTGGTC 005840 005841 CCAGCAAGGA CTGTGGTACT GGAAAACTAA CCAGCTTACA TGCACTAGAG AAGTAGAATT GGACAGTGAT CTGTAGGTAC 005920 005921 CCAGTTTGGA GATGAAATTG CAACTCTGAG TTCTTGATTG GCAACATAAA TACGTTGATA GTAAACAGAC CCTGGGGAAT 006000 006001 CAGCACTTGA GTTGTGAAAA GCGGGAAATA GCTATGCCTA CACTAGAGCC ATTCACACTT TTGCTGGAGC TGCAATAATC 006080 006081 TTCTAAGTCA TGCTTGCTCT CGTGAGGGCA ATGAGATGGT CACAATCCAA GGAGAGTTGG GGTTTTCACT TTTCATTTCT 006160 006161 CTATTAAGTG AAAAAAGTAT ATGAAAATTG AAAAATAGAT ATTACTTATG TAATCTTCAC AGTATAATTT GCTTGCCAAG 006240 006241 CAGTCACTGG GATTTAATCA GTTTCTTTGT CTTTCGTTTT TCTCATAAGC TGAGAGAGTA ATTTTGTGTG CACAGAAGTA 006320 006321 CTGTCTTCAG CTACATGCTG CATTAAACAT TCCTAGATGT GAAATGATTA AATTTCCAAG TTTTTAAAAT GTGGATTTTT 006400 006401 CTGGCCACTT TTATATCTCT TCAATGGGTT TCTAATGGAT TTAAGGAGAG AGCCTAGTCA TGATGAATGG TGTTGTGTTG 006480 006481 GGTATGCTGA GGAAACTTTG AGACCAATGT TTCAGAAAAA ATTATTTCTA TACTGTCATG TTTCAAGTAC CGAGTATTGT 006560 006561 TCTTGTCATA CAGATGGTCC AGTGAACATC TCTGGTGAAT TCCTTACAAC CAACCTCTTG TTACTAAATA TTCCATTAGG 006640 006641 AATGTTTTGT TTCTCAACTC CCTGATTTCC CCTTTATAGA TTGGAAGTGA TATTGGTGGA AGACAACATT TTGCCGCTTG 006720 006721 GAATTCTCAC CTCCACACCA AAGAAGTACT GTTTTTGTCA TTTGCACCAG CTTCTTTCTC CAGGAAAGAT CAAAACGATG 006800 006801 CACTGCAAGG TTAACATCCA ATTTTTAATA CATGTAATTC CCTGGATTAT TTTTGTTGTG TTATTAAATA ACTTAGAATT 006880 006881 TTTTTTACAA AGTCTGTTGA ACCAAACACT GTAAGGCATT AATAACCTGG TGAGTTATTT GAGGCCTTTT TTCCTCTCCT 006960 006961 AGAATTTTTG CACAATTTAT ATTTTGAATA ATATCAGAGA CATCCTAGTA GAGTAATGAA TTAGTACATT TTATATGCAG 007040 007041 ATACATAGTG AAGCCTCCTT TCTTATGCAT ATTTGACAAA TGGACATGTA TATTTCTCAT CTTCCCATAT TTTTACTCCA 007120 007121 TTTCCACAGG TCATGTAGAC CAAAATGTGA ATGTCATATG AAAGAGTTTA AACATTGCCC TTGAAATATG ACAGAAAGTA 007200 007201 TCAGAAATAA TTATACCATT CCATGCTCAC AGGCCAGTGG GAATTCTCAC AGTAAGCATT TTGTCCAGAG AATATTCTTC 007280 007281 TTAGGGAACT ATAACATTCC AATGATAATG GTAGTCAGCC ATGTGGCTGG ATCATCGTTC CTGTATCCTG GTCTCTATGA 007360 007361 CTTAGTGTGG TGATGGTGTC ATTGTGTCCA AGTGTGACAG AATTGTTAGT GTGTAGTGTC TGTCTCCTAT CTCAGGCTCA 007440 007441 CAGTCCCTTT TATAAACATG CCTGGATTGA TGATGGCTTC AGTATCTTTT GGAAATCTGG ACTGAGCAAT AGAATTGCTT 007520 007521 CTCTCAAATT GATTTCAAGT CATATAAAAG GCCATGTTAC ACATATATTG TTAATCTGAG GGAGGCTGTG ATCATTTAAG 007600 007601 TTGTATTTTA TAAACACTAG GACCACCAGT AAGAAAACAA TTCAAAAAAT ATTAAAAGAA CAACCAAAGA ATTAAAATAG 007680 007681 AATAACCGAA AAGATCTGTT TAACACAAAA GAAGGCAGTT AAAGATGAAC AGAGGAACCA ATAAGACATA TAGAAAACAG 007760 007761 ATAGGAAAAT GACAGACATA AACCCAGCCA TATGACAATT ATATTAAATT TTTAAGAGAT TAGGAAATTC CGTTGTTTTT 007840 007841 TAAACATGAG CAACTATACG CTGTCTACAG AAGAGACACT TTAGAACAAA AGATACAAAT AGTTGGAAAG TAAAAAGATG 007920 007921 GAAAAAGCTA TATCCAGCGA ATCCAGAAGA GAGCAGAAGT GGCTATTCTG ACATCAGAAA AAAGAGACTT TAAGATAAAG 008000 008001 TATTGCTAGA GAGGAAGAAG GATAGTATTT AATGATAGAA GGGTTAATAT GGAATATGTA ACAATTACAA TCATATCAGC 008080 008081 ACTAACAACA GTGCCCAAAA CTACATACAC TGAAATTTAA CATGATTGAG GGGATCAATA GGCAATTCAA CAATAAAAGC 008160 008161 TTTTGTTCAT ACCCTCTTCT TAATCAGTGA TAAGTCAATT AGATAGAGCA TCATTGAGGT TACAACATAC TTCAGCAATG 008240 008241 TTGTCAACCA ATTTGACCTG AGATAGATAG ATAGACAGTT AGACAGACAG ACAGACAGAC AGAGAAAACT TCACCCAACA 008320 008321 ACAGAAATAC AAATTATTTT CAAGCATACC TGGAACATTC TCCAGGATAG AGTATATGTT AGGCTATAAA ACTGTACTCA 008400 008401 ATAAATTTAA GATTGAAACC ATGTAGAGTA TGTTGTGTGA CCATAGAGGA ATTAGAAATC AACACAGAAA TAAATTTGGA 008480 008481 GGTCACAAGA TATTTGGAAA TTAACACACT TTACAGAGCC CATTGGTCAA AAATATATAT ATTAAACTAG AAAGGCCGGG 008560 008561 GGTGGTTGCT TACACCTGTA ATTCCAGCAC TTTGGGAGGC GTAGGTGGGC ACATCACTTG AGGCCAGGAG TTCAAGACCA 008640 008641 ACCTGGGCAA CATGGCAAAA CCCCATCTCT ACAAAAAAAT ACAAAAAATG AGTTGAGCAT GGTGGTGCAT GCCTGTAGTC 008720 008721 CCAGCTACTC AGGAGGCTGA GGTAGGGGAA TCACCTGAGC CCAGCAGGTA GAAGCTGCAT TGAACCAAGA TTGCACCACT 008800 008801 GCATACCAGC CTGGGCGACA AAGTGAGACC CTGTCTAAAA AA

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