ENST00000589905.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000589905.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
785 nt |
Genomic location |
chr18+:61034561..61048862 |
Exon number |
2 |
Exons |
61034561..61035092,61048610..61048862 |
Genome context |
|
Sequence |
000001 AGGCCGCCAC CGCCACCGCC ACCGCCACCA CTGCCAGAAT CGCCTCTCGG GGGTCGCCGG GTGTCTCCCA CTCCCCCGGC 000080
000081 CTCGGGACGG GGCCCGCAGT CCGCAGCCTC TCCCGTGGAA ACCGGGCCTC CCGTCCCTGT GCGTCGCGAG CGGGCTCCGG 000160 000161 ACAGCGCCAG ATGCGAGCGC GCCGGGAAGG GCTGCGAAGA CTCGCTCTTC GGGAGCTCGA ATGGCTTCTT AGGACCCCGC 000240 000241 AGGGCGGGTT TCCAGGCCTG CCACGGCCTC CAGTGTGGGC GTGACGAGCG CTCCTCCCTG GAGTTCAGCC CTCGGCTTGG 000320 000321 GACTGCCCGC TGGGTTGCTC GGAGGCCCCG GAGCATCGGA AAGGGCGGCT GGAGGCTCCC GGAGCGGGCT CAGCCTGGGA 000400 000401 GCCCAGCGAC TACGCTCTGA AATCCCGGGC TCCATTCCAT ATTTTTTGGC GTTTTTAGAA GATGGTCACG GCCCACTTTC 000480 000481 GCTTTTCAGA GGACCGGAAA GCCTTAACAG GGAGTTTTGA GGAATCACTA AGAGGCATTG AAGCTTCCGG GATTGGGAGT 000560 000561 AAGCTGCCAT GGAAAGAAAC TCAGGCTGGA CTACTGCATG ATGAGAGATC ACATCAAAGA GAACAGTCCA GCCAGCCCAA 000640 000641 CTTGAGACAC CAGACATGTG ATGGAGCCAT CTTGGATTCC TCACCCCAGC CAACACCATG TGGAGCAGAG GCAAACCCTC 000720 000721 TCCATGGAGT TCTGCCTGAA TTGCAGACTT GTGAATAATA ATAAATGGCC ATTTTAAGCC GTTAA |
Predicted Small Protein
Name | ENST00000589905.1_smProtein_461:757 |
Length | 99 |
Molecular weight | 10750.7674 |
Aromaticity | 0.0408163265306 |
Instability index | 58.8255102041 |
Isoelectric point | 5.46307373047 |
Runs | 13 |
Runs residual | 0.00638947167652 |
Runs probability | 0.0346296522767 |
Amino acid sequence | MVTAHFRFSEDRKALTGSFEESLRGIEASGIGSKLPWKETQAGLLHDERSHQREQSSQPN LRHQTCDGAILDSSPQPTPCGAEANPLHGVLPELQTCE |
Secondary structure | LEEEEEELLHHHHHHLLLHHHHHHHHHHLLLLLLLLLHHHHLLLLLLLLLLHHHLLLLLL LLLLLLLLLEELLLLLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |