ENST00000603748.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000603748.1 |
Source |
Gencode19 |
Same with |
NONHSAT073626 |
Classification |
intergenic |
Length |
1482 nt |
Genomic location |
chr2-:111968572..111970053 |
Exon number |
1 |
Exons |
111968572..111970053 |
Genome context |
|
Sequence |
000001 GAATACATTG ATTGGGTTTT GATGTTCAAA ACCCAATCAA TGTAAATCAC TATTAACTAC AAAATAAAAG CAATATGATC 000080
000081 ATCTAAATAG ATGTAGAAAA AAAATCTGAA AAAAACCCAA CACCCATTCC TGATTAAAAA CTATTAGAAA ACTAGGAATA 000160 000161 GAAAAGCATT TTCTCAACCA ATTGAACAAT TGAAGGGTAG CTATGAAAAA CCTACAGCTA ATATCATATT TCATGATAAA 000240 000241 AGATGGAGTT TTCTTACTCT AAATTCAAGA ATCAGGGAAA AGTGTCTGCT CTCACCACTC TATTTAACAG TGCTGGAAAT 000320 000321 ATTAGCCAGC AAAACAGATA AAGAAAAATA AATAAATGGC ATAGACTGGA AAGATTCATA GTTGGCACAA TTATGTATAT 000400 000401 ATAAAATCCT CAGGAATGTA CACTTTACAT ACTAGAATTT AAAAGTAAGT TTAGCAACTG TGTTAGTTCG TTTTCATGCT 000480 000481 GCTGATAAAG ACATACCTGA GACTGGACAA TTTACAAAAG AAAGGTTTAT TGGACCTATA GTTCCACATG TCTGGGGAGG 000560 000561 CCTCACAATC ATGGCGGCAG GCAAGGAGGG GCAAGTCACA TCTTATGTGG ATGGCAACAG GCAAAGAGAG AGCTTGTGCA 000640 000641 GGGAAACTCC TGTTTTTAAA ACCACCAGAT CTCATGACAC CCATTCACTG TCAGGAGAAC AGCATGGGAA AGACCCACCC 000720 000721 CCATGATTCA ATTGTCTCCC ACAAGGCCCC TCCCATACCA CATGGGAATT ATGGGAGCTA CAAGATGAGA TTTGGGTGGG 000800 000801 GACACAGAGC CAAACCACAT CAGCAACATG TCAGAACACA GAAAAAATGT AAAATATCAC TGTATTTCTA TGTACTAGTA 000880 000881 GTGAACTGTC AGATGTTAAA ATTCAATTGC TTAGAATGGC ATCAAAAATA TGAAATACTG GCCAGGCGTT ATGGCTCTTG 000960 000961 CCTGTACTCC CATTGCTTTG GAAGGCTGAG GCGGGTGGAT ACCTTTGAGG CCAGGAGTTC AAGACCATCC TGAGCAACAG 001040 001041 GGCAAAACCT TGTCTCTACT AAAAATACAA AAAATTAGCT GGGCATGGTG GCCTGTACCT ATAATCCCAG CTACTTGGGA 001120 001121 GGCTGAGACA CAACAATCAC TTGAACCTGG GATGCAGAGG TTGCAGGGAG CTGAGATTGA ACCACTGTAC TCCAGCCTGG 001200 001201 GGAACAAACT GAGACTCTGT CTCAAAAAAA AAGAAAGAAA TACTTATGGG TAAATCTGAC AAAATAAGTG TAAGACCTGT 001280 001281 ACACTAAAAA CTACAAAACA TTGCTGAAAT AAATTAAAGA AGACCTAAAT AATCGGAGAG ATATACTTTG TTTAAAGGTC 001360 001361 AGAAGTCTCA GTATTGCTAA AATGAGAACT CTTCCCAATG CAGTGCTAAT CAAATTTCTA GCAGGCTTTT TGTAGAAATT 001440 001441 GAAAAGCAGA TTTGAAATTC ATATGGAAGT GCGAACAAAA CC |
Predicted Small Protein
Name | ENST00000603748.1_smProtein_1151:1252 |
Length | 34 |
Molecular weight | 3838.4612 |
Aromaticity | 0.0606060606061 |
Instability index | 55.2666666667 |
Isoelectric point | 9.74322509766 |
Runs | 5 |
Runs residual | 0.0326086956522 |
Runs probability | 0.0390567037625 |
Amino acid sequence | MQRLQGAEIEPLYSSLGNKLRLCLKKKERNTYG |
Secondary structure | LLLLLLLEELHHHHHHHHHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |