LINC00893

From LncRNAWiki
Jump to: navigation, search

Annotated Information

Approved Symbol

LINC00893

Approved Name

long intergenic non-protein coding RNA 893

Previous Symbols

_

Synonyms

_

Chromosome

Xq28

RefSeq ID

NR_027455

OMIM ID

_

Ensembl ID

ENSG00000241769

pubmed IDs

10737977

Sequence

>gi|611435044|ref|NR_027455.5| Homo sapiens long intergenic non-protein coding RNA 893 (LINC00893), long non-coding RNA

000001 GCTGCGGGAA ATTGCTGGAG AAGGGGGAGC CAAGCTGGAG TAAGGCTGGC GGTCTCCCGC ATTGACTTCA TAACCAAGTT 000080
000081 CTGGGTCCCT GCCTCTGGAG TGCCTGATGA GACAAAACGG CTCCTCGTCC TGCATCCCCG CTGCTACTTC CAGAATTCAG 000160
000161 GCCTCGTGGT CTGGAGCCTG CACTGTTCCA TGAGCCTCCT GAGCAACCTG GAGTCCTCTG TCTTTCTTCC CTCAGTGAGA 000240
000241 TGCGCCTACT TCTCCCTGGA GAAGCTCGAG GAAGCAGGAA TGCTGGAGAT GAGCTGCTCC TCACTCTCAC TCCTGGGTGT 000320
000321 GCTGGGCAGT GGGGTGCAAT GTGCACGTAG GTGCACACTC TCCCTGGGCG GCAGCGAGAA GCAGAGGTCT GATCTGTGGT 000400
000401 CGGATGAGGA GAGGAAGTGC AAGTAAAGCA GCTGCAGCGA GACCTCGTCT GCTCAGGGGC TTGTTCTTAC ATCTTTTGCA 000480
000481 GGGCTGTTTT GAAGTCAGTA TTCACTTAAG CACTCCAAAT TACCCAGCAC ACCCTGCCTG CATGGCGCTG CGCTGCACCT 000560
000561 TCACTCTGGT CACGGGTCTG GCAGTCGGCT CACCAATTCG TCCTGCTTCC CTGGGACTCG CCGGCTTTTA GCACTGCAAT 000640
000641 TCACTCAGCA AACTGGGACT GTTGGTCACC CTACCTGGCA GCCAGTGATA AGGTGAGGGC CACTCCTGGG AGGGAGGACA 000720
000721 CCTGTGGGGA AAATTCTTGT GTTATTTATT TCTCCTTCGG GATAGGGTGC CTGCAGCGCT TCATGGGAGG GGGTGGGCTG 000800
000801 ATGCTGCGGG CTCAGAAGTT TCAAGGGCAT CTGGGGAGAC CAGATATTCA GAGACCTTCT CCTAGATGTG CCTGTTCCAT 000880
000881 GTATCAGGGA CACAGGTTTT CCCAACAGGG CTGGTGTCAT TGGCATGACA GACCTGCCTT GGCTGAGCGT TCACCCGTCT 000960
000961 TCGGAGTTCA GCCACCTTAG CAAGTCCTGG GTTTGTTCTT CAGATTTTGC TGCTCGCCCA TTGCCTGGAT CGGGGGCTAC 001040
001041 TTTGTAAACC ACCAGGAAGA CTCCAGTGTT TCTGCTTAAT TTTTAGATGT TTGTTAATTG CTCTTGGCCT CTCATTAATC 001120
001121 CCCTGTGGGT CATCCAGGAA ATATACTCAC CACTGTCTGT TCTCTGAGTT TTCATTTCCA GGCATCCGCC CTGCCTGGAT 001200
001201 CTCCTCACCT GCCAGGAACT TCCTCTCCAC AAGCCGGCCA TCCCAGCAAA AGTTCTAACA CCAAAGATGA CTGCCAGGGG 001280
001281 CATGAAGGGG ATGTGCTTCC AGGGCATTTG CTGGCAGGGC GTCTCGTGAT CTCTTGGTAT TGGTGTGAGC ACAGCCTGGC 001360
001361 AGGAGAGGGC AGATCTCCAT GCAAAGTATG TCAGAAAGCA GATGGAAGCC AGGCCCCCTC CTGAAAGAGG CTCCTTGAAG 001440
001441 ATAATTCTAA CATCTTTGTC ATCAGTGTTG ACATCTCTTG ATTGTATCCT GTCATTCCAT TTGAGATCTT CCTGGTTCTG 001520
001521 GCTGGCATCC TCTGACATCA CTCCAGCAGA AGAAAGGGAA GGAACACGCT GCATTACTGC GTGGTCACAA GGTCCCCGTC 001600
001601 TGATCTGCCT TCACTCCACC TTTCAGAGTC TTATGTTTGT TTTGTGTATA TTATCAAGGG GTTTTAGGTC ACTTAGTCGG 001680
001681 AAGAATAGGG AAAAGTATGT CTACTCCAGC TTAATGGAAG TGGAATTCTC CTGAGAACCT TTTTTTGATA CAAAATATGT 001760
001761 ACTTGTGCAT ATTTTGTATC AAAATATATA ATGTACATGT CCCTTTTGTA CATGTATATA AATTGTATAT AAATATTTAG 001840
001841 GGTTATAAAA ATAACCAAAG ACACCAAAAA CTGCCACAGG TGGATTTGAG AAGATGTGGA AATGCCTCAC TGCTAAGACA 001920
001921 TGCTCATTCT TGACAGGCTG GGAACCCTGA ATGCTGTAGT GTCACCACTG CCCTGTCCTG TACCTACCTA TCTTTTCACT 002000
002001 CATTTCCTCC AAGCTCAGGT TTTCAGTTTG GGGTATGTGC CACCTAACAG TGAGCTGTGG AACTGCAGCA CAATCATCAA 002080
002081 ATTCAAAAAA GGCAAGGACA TCTTGCTCAG TTTTTAAGAT ACGCCATAGA TGGAGTAAAC CATAACCTTT GATTCCAGAT 002160
002161 CCTTAACCCT GATTAAAAAC AACACAACCC TTCATGTTGA TTTAAAACAT CCCTTGCAAA AGATGGTTTG AATATTCCAA 002240
002241 GTTGGAAATA CCCAGTCTTT TAAAGTTACA GCACCCTTTT TGATACAAAA AATGTGCATG ACAGAAATTG TACAGTGAGT 002320
002321 AGTGTTATAA AAATAACCAA ACACACCAAA AAAAAAAAAA AAAAAAA

Predicted Small Protein

Name LINC00893_smProtein_782:979
Length 65
Molecular weight 7314.3079
Aromaticity 0.0923076923077
Instability index 85.4523076923
Isoelectric point 10.1112670898
Runs 9
Runs residual 0.0118269230769
Runs probability 0.0280182142927
Amino acid sequence MGGGGLMLRAQKFQGHLGRPDIQRPSPRCACSMYQGHRFSQQGWCHWHDRPALAERSPVF
GVQPP
Secondary structure LLLLHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLEELLLLEEEELLLLHHHLLLLLL
LLLLL
PRMN -
PiMo -