Lnc-FOXA2-2:1

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID	lnc-FOXA2-2:1
Source	LNCipedia2.1
Same with	NONHSAT078991
Classification	intergenic
Length	4376 nt
Genomic location	chr20-:22541191..22559347
Exon number	5
Exons	22541191..22543929,22544533..22545754,22547321..22547443,22548432..22548523,22559148..22559347
Genome context
Sequence	000001 CGCTGATCGA TATCTTGGTA AAATATTCAT TTTTAAACTA GCGGGCAGTG AAATCTTTGC TTTGTGTGCT AAAGTCAACA 000080 000081 GTCGCTTGGT TTGAGCTCAA ATAAATGCGG GGATGCCTCG GCTCGGAGCA GTCGGCCTCC TCCCTCCGCG AGCTGGACGC 000160 000161 TCCGCAGCCC GCCCGCCAGC CGGCCCGCCG GCCGCCGCAG GAATCCCTGG ATAAAGACCA GCTCAACCAT CGCTGAGAAA 000240 000241 ACAGACCTAG GCTTCCCAGG GCGGTTAACC CGCCGGCCTC TGGGCAGAGA CTACAAAACA AAATAAAACA ACAACAAAAA 000320 000321 ACTCCCAGTG TGTTTCCTAC TCTTCTTTGT CTTGGAGGAA AGCAAAGGGA GAGAAATGGA CTTCACCAGT GGTCTTTGGC 000400 000401 TTCATCAATT CACAGGAAAT GGCATCAAGA TGGTTCAACT AAGACATGAT CACTAAAAAC ATTATAATAA TACCTTTTTG 000480 000481 AAAAACTCAG TTTCTCCTGT TTACTAAATA TTTATTTCAT CAACATGGGC TGCGTTCCAC TGTGTCAGGA TTCTGCATGT 000560 000561 GGGTGGAGCA CTGTTCCAGC CTGAGAAGAT GGTTCTGAGG CCACTTAGCA AGACATTTTC CAGCATGAGC AGGTTTCTCT 000640 000641 GTGGAAATAG TGACACCTGT TCTGGTGTGT TGTCTTTCCT CAGGGAACTT AAGGGGTACA AAGCTCCTGA AAATGTTCTT 000720 000721 TATGCTGGTT GAAGCTCTTA TGTCGCTGTA CTGATTCCCT ACGATGCAGA TTTGAATCAC AGAGTAATTA AAATATGGAT 000800 000801 CAAATAAGGC TGGGGCTCAC CAAGGCTGAA AGCTGTAGCC ATTCAAGGCA TCATTTCTGT CATGAAAATA TAGGACCTTT 000880 000881 TCAAAACATG CCTTCAGGAA GGTGTTCTCT TTTCAAACAA AAGTCTAATG ACTGCATAAC TCTTCTTGAC CACATCTTAC 000960 000961 ACTTTCTCTA GACTTGCTTA TTTACAGCTA CTGGAACAAA AAGATGAAAT GAATAAAGCA CACTGATTGT CCTAAGAGTC 001040 001041 TTCTGTGACT AAAAGCACAT GAGCTTCTCC CCAGGCTGAG CTTTGACCCT CCCAAGCATT TCCCCAAAGG CCATGACACT 001120 001121 GCATCAGATT GCTCCTGGAC ACTTTCCTCA GAGTTTTCAA CAAATATAAA CTGAGGAGTG GAGCACAGCA CCAGATTTGC 001200 001201 TAATCAAGAG GCAATGGTCC CAGTCCAAAT GGGTGCTGTG TGTGAATACA GAGCCCAGGA GAAGGGAAGG AGGTCTGTGA 001280 001281 ACATCAGGAA TTGCAAAATC TTGCTGAACC AATAGACCAA CAGCCATTAA CATTTGTCAA TGCAAAGATC CTAAAATATA 001360 001361 CAAGTGTGGA GTTGTCCTGC CCTAAGAGCT GAAGCTGTGA CAATCACGCT GCCATGGTAG ATATTTAAGC TCCCCTGAGG 001440 001441 TTACTGAATC TAACAATGAA TAAACAATGA AGAGTAGCTA ATTTTTGGAA ATCTCTTTCT ATGACCGGAA AATATTCACA 001520 001521 AACTCAGAGT GATTGTTTGG GGTGAAAGAT GGTCCCATGC CTTGTGGGCC TCTCTTTGCT ATCTATACAA CGTTGGAAAT 001600 001601 GAACCCCTCC CTTACAGGAA AGTGAACAGC AACCAAGGAT CAATATTTCC AGCAAAGGAG TCCACACTCA AGATACACTG 001680 001681 CTACGTCTCA CTTTTTCCTT GACACAACAA TTTATTTTAT AAATGCATCT GCTGGAGAAG AAAAGGCAGT ACCAAGGATT 001760 001761 GTGTCTTTTA TCTCCAGGAT ATGCAAAGCG CATTTATTTT CAGCTTTTAT CTCTGGAATT GTATGTTGAT CCCATACATA 001840 001841 TAGATTGATT TTGTTCAGGT AGATAATGAA AAGTCAAGTG GAAAATTACA CAATGGCATT CACGATCCTA GTCTTATATC 001920 001921 AGTATATAAA TTGGTTTATT ATTTCATTCT ATTAAAGAGG CTTTTTTTTG GTACCAGGAA AACTTCAAAA TGCATTGTGT 002000 002001 TGTCAGCCTC ACTGAATTTT CTTTTGGAGG AGGAGGTAGG GAGGGGAAGC CAAAGCCCCG ATTTCTCCTG CTCCTTTTGC 002080 002081 TAATTGTATT GGCTAAATGA GCTTTCACAG AGGGGGGTCC TGGCTGCTTT TTGCTCTCCC CCAGACCACT TGTAGGTTGC 002160 002161 ACACAGGGCT TCTATAACTC TTTCTGAGTC AGGACAAAGA TATCCGCCGT GCACACCCTG TGACATAGGT GGATATTTAT 002240 002241 TTCATCCCGG GCAATTCTAA ATTTTGTCAT GATGACTGAA AGAGGCAATC CCCTCCTGAG CATTAAGAGG CCAGGGGTGA 002320 002321 GAGGGTGGCA GCATAGAAAA GCCACCACCC AGAGACAGCT TGGAGCCATG ATCCTGGAGG AAATGTTATT AATAAACATC 002400 002401 TTTTGGACAT TTGGTAGCCC GTGGAGCTTG CTCCAGCTTA AAGCAATTAA TTCAGGACAC TGACATAAAC TCTCCAGATC 002480 002481 TTTGACAGCT TGGAGCCGAA ATAAAAATGC TAGTTCTCCG GGGAAGAGAA GAGGATGGCT AGCCCTTTTC TGGACTGTTT 002560 002561 GCTTATAGGC CCAGAGAGCA ACCTTCCTTG CAGAATGAAA TGCAAGGGCA CAAACAATGT ACCAGGGAGA GAATAGAAGA 002640 002641 TGGGAATGAA CAGTTTGAAC TATTTGCTCA GCAGAAGGGC ACCACAATGC TGGGGTAGTG GTTTTCCCAT GCGTCCACTG 002720 002721 TCCCTTCTTT GGGATCTTTT GTTGTCCCCT GTCTCCTTTG GCCAGATAAA AGCACAGCTG CAGCATTGCA GATAACAAGT 002800 002801 AGGCCGTACT TATCCCCCTA AATCTCGGGG TGCCTTTACT GTAACAAGTT ATGCTCGGCT CTCTTTTATT TTACAAGAGG 002880 002881 ATGGTGAGGG AGAGAATGGA AGAACAGAGG GGGCGGACGT ATAAGACATT TGACACTGCC TATGTCTGAT TTCTCTTTCT 002960 002961 TTCTTTCTTT CTTTCTTTCT TTCTTTCTTT CTTTCTTTCC TTTCTTTCTT TCTTGCAAGC TGTGATCGGA TGCAATCTTT 003040 003041 GTGGGACATT TAAATGGAAG GGTTCATTGA TGTGTATTGC TTGCCAAGCC AAAATGTTGC CTTTGGGGAA AAGGGAGAGA 003120 003121 GGTGTTCATG GAGTGCAGGG AAAGGAGGTT TTGGGGCAGA GATTTTGACT TAAAATAACC AGACTTCTTC TGGCTGCTGA 003200 003201 AAAGAGGCAA AAGTTTTAAA TTGTCAAGTT TAAAACTATG TTCAGTTATG ATTTGCCACT TCTGAATATT ATTTTGGATT 003280 003281 TCCCCTTTCA TGCTTATTTT GTTCAGAATC CTAATGAATA GAGGTTGCTG GACTCAGGGT AAAAGCAGGA TGAACTGGAG 003360 003361 ATGGGACATA CAAGGTACTT TTGGAATTGC CATAGATTAC ACCTATAATC AGAGTAAATG TCATCAACAA ATAATCAAAA 003440 003441 TATTTTTTAC ATTTGCTCTT CTAAAATCAG AGCCTATTTT AAATATAAAA GAAAGTAGAT GTGATAATAA TATAAACTAC 003520 003521 AGTCACATTA AGTTGATATT AAATTCAAAA TCTAACATAG ATTTGCACTG TTGGGTGTGT GTTCCGAATC AGTGGGTTTT 003600 003601 CCCACTGATG TTGATTTCGG GAGCCAGGCT TCAATGTTTA ATTCTATTGT AATGTGGTTA TTTAGCCTGA ATGGTTTTAT 003680 003681 AAGGTGGAAA GGCAAAAAAT TTAATTCCGA AGAAAACTAG TGTTTTACTA TGACTGTGGT AAACATTTCC AAAGCCCACC 003760 003761 TGTGGGAAAT ACAAAGTTTT AATGCTGTGT GTTTTTTTGT TTTTGTATTT TGTCTCATCG ACAAAACTGG CAGAAAAAAA 003840 003841 CGCTTTCGTA TATTTTTCCT GCTGGGTGGT CAGAAGGAAA GGCCGTGAAG CTAAAGGTCT CCCACTGAGA CGCTGTTCTG 003920 003921 CAAGGAGCCG ACCTCACGTG CCGCCGCCGC CAGAGAAGAG AGCACCTGTT CATCTCGGCT CACTGTGAGG CTGAGCTCAG 004000 004001 CGCTGGCAGG CGAGGGGCCG CAAGCATCCC CCACAGCCAC CGAGAGGGCA TCCCTGCAGG GAAATCATAT CCGACATGCC 004080 004081 TGTGCCCACA GCAGACTTAA GACTGCCTCT AAAATGTCCA TGAAGCCATT GTCCAGTAGA GCTGTTAGTT TTAACACCAG 004160 004161 TGAGTATTAC CTTTGGTTAA AAGGATGCAT GTGTATAGGT GTATGTGTGT GCGTGTGTGT TTGTGTTTTT GGACTTGTGT 004240 004241 GGAGAATGAA GAAAGGGTTC CATTTAGGCA TTTGCAAATA TTCGATGGCA TCATGAAAAG ACAAAAAAAT CCTATAAAAT 004320 004321 ATATCATATT TTGCTATGAT TTTGTGTGTA CATGTAATAA AATTATTAAG TATAAA

[back to top]