Lnc-SLAIN1-4:1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-SLAIN1-4:1
Source	LNCipedia2.1
Same with	NONHSAT034452
Classification	overlapping(AS),antisense
Length	4001 nt
Genomic location	chr13+:79152611..79193239
Exon number	4
Exons	79152611..79152798,79179436..79179579,79181107..79181345,79189810..79193239
Genome context
Sequence	000001 GTAAGAAGAA AGCCCAAAGA CAAAACCAGA GGCAACTGGC TGCTGCATCG CCCACCTAGT GGCAGTAGTG TGAGCTATGG 000080 000081 ACAAAAGATC TAAGTCTCCA GGACAAAGAG TTGTGCAGCT GCTCATTTTC CTGTTGACTT CTGTCTAAGA CTTGGAGATG 000160 000161 TTTGTAAGAT TGGGACCTAC CTACAGAGCT CCAGAGGGAA GTGAGAAGGA TGTTCACTTG CTGGTGAGAG AAGGAGCTGG 000240 000241 TTCCATCCAT TACGCAGTCC CCTGGGAGCG CTAAATGCAA CTTTATCTCA ACGGGGAGTG GACGATGAGC AGGACGTCGC 000320 000321 TAGAGGGAAA GAGCCTCACT TCCCGTTTCC TTTGGCAGCG CCCTTTTCCC GACCTAAGGG AGCAGACCTT CGTTGGTTGG 000400 000401 CGTGAGGACT GGCGGGAGAG GTTTTGTGCC AGGATCCGCA CTGTCTGGGG TGAACGCTCC TCACCTTTGA CCTGAACCGC 000480 000481 CAACTTCCCA TCCTCCACTT TTGGAGAGCG CGCCTGATAG CTGCTGCCCA CCTGGGCACT GACATCCTCC TTCCGACCGG 000560 000561 GTGCGGAGAA AGCACAAAGG AAGTAGACCA AGGAGACTGA AGGTGGTTAT GAAGACTGTG CATCTCTGAG GACATCTTAA 000640 000641 ACAAAGATGA CCCAAATCTT TGATCTTCAA ATAGTCGATG TGAACTGCTT AACAAAATGC CCTGGGAAAA CTCTGTCTGA 000720 000721 AACAAGCAGC TTGGGGGTTT GATTTCATTA GTTACTGGAC AAGAACTGGA ATGGAGTGAA AAATCTTCAT TCATTTCTTG 000800 000801 GTCAGATGGA GAGAGGAGAA AAAAAGAAGT GGGTTTCCAT TCACTTCCAT TTTCTAACTG ATCATTAGTT AGAGAACCTT 000880 000881 TGGAAAGGTT TAGCTCAGTT TTTTCTTCCA ACTTATCAGG TTCCTCAAGA AATTCACTGC CTTGAGATGA CTTTGATAAC 000960 000961 CCATCCAAAT CCAGTGACTT AAAACCGTTA TTACAAGGGC TCTTGCTGTT GTCTGACTCT GACATCATTG AATCCAACTC 001040 001041 AGAGATTTTG TCAAGGTAAG CAGCATCCAT CGATGCTTCA CTGGATGTTC TTGTCCGGTT CATTTCAAAA GAGCGAATAG 001120 001121 AATTCAACCT TTTGGATAAA CATAAGCCTG ATTTCTCACT CAATTTTGAA GATATTTCTC CAACAGAATT TGCTATCGTG 001200 001201 TTCCCCTCTG AACTTTCAAA ATCTAAGTTT TGGGCATAGC TTGTGGAACA ACAGTCCCAA AATCCTGTCT TTGGGGAAGA 001280 001281 AAAACATTCT GATTTCTTTT CATTTTCACT TCTACTTATA TCATCTTCTG AAGAATCTTT ATTAGAAACA TTTGAAGAAT 001360 001361 CACAAAAATC ATCAAACACC AATTTTCTGA GATGGTTTGA GTGCTTTTTG GAACCTCCTG CTTGGACCAC AGAGCTCTCT 001440 001441 CTATTTTCTG GAGTACTGAG CTGAAGGCAA CTAAGGGACA AAGGAGTACA AGGAGCTGGA AGATCATAAA GTTCTTCATC 001520 001521 TTTGTAGGGT ACACAGTCAC TTGGTTTATT CCCCCATTCT CTTTCCAAAT AAGTATCCAT ACTTGTATCT GTCACATCTA 001600 001601 ACATTACTTC TACCTGTTCT TGATATAGGT CTTTGTTCTT AGAACAGTTA AGGTCTGCTT TGCTGGTACT TTCCTGCCTT 001680 001681 GCAGAACTGG TGTCACACAG TCTGCTGCTG GAAGGCTTCG CTAGGTGAGA AGAACTGGAG GTGGATGAGC CAGGCTGCTT 001760 001761 TCTGGCACTA TCGCCTTGAT TCTTTGACAC CACATCCTCC TCACTGCCTT TGCTCCCTTT GCCATCTGCA GAAAGTGCTG 001840 001841 TCTGGCAAAT GGAATTCATA GCTTCTTTCT CTTCACTTGA ATTTTTTAGC TGTGCAACTT GAGATTCTAG TTCCTCTATA 001920 001921 TACTTATCAC TTCGTTCCAG GGCTTTCTTG AGGCGATTGG TTTCACGCTC ATACTGTTCT ACTTTGGACT GAAGAGCAGC 002000 002001 AACTGCAAAC CTTCCAAACC TACAAAGAAT GGAAAGATAG TTAATCTTAT AACTCAAGCT TTTTTCTTTT CAAGGTTTGA 002080 002081 GAGTGCAAAC TGTCCCAGGC TATTCTAATT TCACCTAACA GTGACATTTC AGACCACTCA ATGAGTAGGG CAAATGCCAG 002160 002161 ATGTATATTT TCAAAAAATG GTTTCCCCAC TTACATAATA ATAAACATAT GATAATAATA GCAAAACCTA ATAGGATATT 002240 002241 TTTGTGGTTA AATCAGATCT ATGGTAGCAG AGAGGCAGAA ATGTGCTGAT GATTTCCCCT CGAAGAGCTG GCTGTATCAA 002320 002321 TTCAGCTCAT ATATGCATGA AGAGTTATCC CCTAAAACAA TGGCAAAGAT TTATGATAAC ATTTGAACAG TGGTCTACAT 002400 002401 CTTGAAATAT TTACATTCAA TCATTTTCCT ATCATACAGC AGTGTTTTAC AATACATTTC TTATATAATG TCACCTTGTC 002480 002481 AAACATAAAA TGCCAATTTG AAATTCAGAA ATCTTAGCAG TCCCAGGAGG GGTGGTTTTA AATACTTATT TGGGCCCTTT 002560 002561 CAATTATAGC CACCCTTGAT CTGAAGCTTT TCTGTGGCTT TTCAGAGCAC TGGCCTTTAA TTTATGTCAG CACTACTTAT 002640 002641 TTTTGGCATT TTACAGCTGT GTGGGACATC TATCTCATTT CTTTCAACTT TGAAATATGA AGTCAGTGCT TGTGATTCCA 002720 002721 ATATACTAGG CAAAAAAAAA AATTTTTTTG TACACTTTCT GAAAGAGAAC ATTTTGGAGA GTGACTGAAA AAGAATTCCC 002800 002801 TTATTCACAA AAAGTCTACT CCTTTTACAC CGGGATTATC TTGCTGTTAT TTCCACCAAG AATGAGTACT GTGTTAAGCT 002880 002881 CAGGAAACAA TTTTTGAGTA CCTAGTATAG GTTAGGTGGT ATATTTGGGG CTGGGAACAC AAAAGATAAA AAAGACTGTC 002960 002961 TAGCTCCAAG GGACATAAAA TATCTACCTT AAATTCAATC TTATCACCAA AAATAAATTC TATCTTTCAG GAAACTTATG 003040 003041 AGCCAATAAA TAACATAATC CCGTGAAAAA TACCTTATCT CCTCCAAAAT TCTTTTCAAA GCCTATTCTT AATCATCTTT 003120 003121 TTGATGATTT ATATATTGGC CCATTTCTAA GAATTAAGGG ATTGTCTGTT TGGAGGAAGC TATGAGAAGG TGACTTTCAA 003200 003201 AAATTATTTT TATCTTTGGG TTTATCTTTT TCTTCCTTTT TTCCCCTAAT TTGAAAAATA ATTACAATTA AGAACATGTA 003280 003281 TTTAGTATTG AAAAAAAAAA CTACAAAAAA AGCAGAAGCC AATAGCAATT GCCCCTCTTA GAATCAACCA CAACATGTTT 003360 003361 TCAACTCCCA CTTAATGCCC ATCACCTCCT AAACCACTAG CCCAATTCAT TCCCCATCTC AACCCCTACA TAATCCCTGC 003440 003441 ACTCTTATCA CTGAAGGAAA AAGCAGAGGC AAAGGTAAAT ATAGAATCAT AAAATCTCAA GATTAGAAAG GGCTTTAAAA 003520 003521 GACATGATTG CTGAATATTG ATTTACTCAC TGCAATTAAC TGAACCCCCA GAGAGAGCAC GCTCCCTTCA ACTTCTAAAA 003600 003601 AAACACAGCA AAAACCACAG GTATAACAAA AACAAAAGCA ACTATAATAA CAAGCCTCCC CATTTTAAAG ACAAAGTTTA 003680 003681 CTACTGTATT TGGTTAAATG AATGATGGGA ATTTTTCTTC TTTGTTAAAA ATGTTTTGGC TTATAAATGT AGTACTTCAC 003760 003761 AGAGTTGTAG TTCTGCAAGA GAACTTTTAA AAAGTGGGCA AAGACCTTTC AGTACATTAA GTACAAATGT TTGTTAGTTC 003840 003841 TTGATTGTAA CTACTCTGGC ATAATCAAAT AACCCACATT TTTAAATGGA AAAACTGTAG TATGTTTATT TAATGCCAAT 003920 003921 AAGCAAAAGT GACAGCCTTA CATTTGCTTA TCAAGATAAA TTTCTTCAAG TAAAATTTTT TATAATAAAG GTATCTCCTC 004000 004001 A

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