NONHSAT001202
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT001202 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
882 nt |
Genomic location |
chr1+:17054489..17058366 |
Exon number |
3 |
Exons |
17054489..17054605,17055794..17056322,17058131..17058366 |
Genome context |
|
Sequence |
000001 TCTGGCAATG TCTGTCAACA GGTGTTGGCC TGAAATTTGG CCGGGCACGT TGGCTCATGC CTGTAATCCC AGCACTGTGT 000080
000081 GAGGCCGAGG CGGATGGATC GCTTGAGGTC AAGAGTTAAA TTGCCATCAT CTGAGAAAGG CCTGTTAGAG CCCCTGTCCA 000160 000161 GGTGATTCCC ACCCTGTGTC CTCTTAGTTA TCACTATTCT GATGTCTATT CCCACAGGTT ACAATTGCCT GTTCTTAAAG 000240 000241 TTCACATGAG TGAATGTACA TATGTTTTGT GTCTGGCCTT TTTCTCCAGT TACATTCATT ATACTCATGA GATATATCCA 000320 000321 CGTAGTTTCA TAGATCACTT CTCAATTTTG GGGTTATTGA TTTCTTGTGC TGAATATTCT TATAACAGTC TTTGTGTGCA 000400 000401 CTTGAGATTC ATGGAAGTCC TTCAATTGCT GGGTCATGAC CTGAGTATAA GTTTAACATC AGTATAAATT GCCAGTCTTC 000480 000481 TAGAATGCTT TTTCGCCAGC GATGACAGTT GAAGTGGCAC CAAATTCTTG TCAGCATTTG GTGTACTAAC TTTGTTAAAT 000560 000561 GTAGCTATGC TCTCAGACCA GGCTGGCCAA CATGGCAAAA CCCTGTCTCT ACTCAAAATA CAAAAATTAG CTGGGCATGG 000640 000641 TGGCATCGGG CTCTTTTTTG GTTCCATATG AACTTTAAAG TAGTTTTTTC CAATTCTGTG AAGAAAGTCA TTGGTAGCTT 000720 000721 GATGGGGATG GCATGGAATC TATAAATTAC CTTGGGCAGT ATGACCATTT TCCCGATAGT GATTCTTCCT ACCCATGAGC 000800 000801 GTGGAATGTT CTTCCATTTG TTTGTATCCT GTTTTATTTT GTTGAGCAGT GTTTTGTAGT TCTCCTTGAA GAGGTCCTTC 000880 000881 AC |
Predicted Small Protein
Name | NONHSAT001202_smProtein_245:466 |
Length | 74 |
Molecular weight | 8442.714 |
Aromaticity | 0.150684931507 |
Instability index | 61.898630137 |
Isoelectric point | 5.54205322266 |
Runs | 7 |
Runs residual | 0.0482545293858 |
Runs probability | 0.0198601963308 |
Amino acid sequence | MSECTYVLCLAFFSSYIHYTHEIYPRSFIDHFSILGLLISCAEYSYNSLCVHLRFMEVLQ LLGHDLSISLTSV |
Secondary structure | LLLLLLHHHHHHHHHHHHHHHHHLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHLLLLEEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLL LLLLLLLLLLLLL |
PiMo | oooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiii iiiiiiiiiiiii |