NONHSAT001690
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT001690 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1344 nt |
Genomic location |
chr1+:25559015..25560358 |
Exon number |
1 |
Exons |
25559015..25560358 |
Genome context |
|
Sequence |
000001 TCAGACAAAC GGGCCGATAC GTACGAATGG GCTACCATAA GCCCCGCCCC TTCCGGGAGG TCTCCGGAAG TTGGGACCCT 000080
000081 TTTAGCTATG AAATATTTTG GATTGCGTAG GGTCTTGCGC AGCCGCGAAA AGTAGCGTGG GCCAGGACAG CGGGAGGTAA 000160 000161 GTCGCCAAGA AAAGGGTTGG GAAGAGCTCA GAATCGGACG GCTAGGAAGA AATGACCAAA AGGAGCCTGA TAGCCCCCTA 000240 000241 TTCTGCACGC TGTTCCTGga aaccgccttt gcaaagacag tgagagaaat ctaacatggc tcactccatc ttgcttctag 000320 000321 cctcgcaggc cggctgtctt cgctcattcc tgggcataaa ccaagctaac catgggagaa tttatagttt aacttttaag 000400 000401 caaggatgat catagtccct tccttaaaca gggcccctcc ttgtttgggg gctgaaactg cctttataaa actaatgaaa 000480 000481 gaccgggagg ttaggattat gaggggagaa ttctgctaaa atgtagtaaa cgataaccag ccattgtttc ggaggacatc 000560 000561 ggatgtgtaa cttccccaat tattcctgta gataacgtta tcgtagcacc taagattggt cttttgaggc atttttcaga 000640 000641 ctttcgcatt ctggcaacta actgacccca cccagactcg tgacccatga cccaaccgct tcttctgtcc cactcctccc 000720 000721 ccaagaggcg gactcagctg ttgaggagtg tagtccacac ccctgtgatt gcatctccaa ccaatcagca gcatccattc 000800 000801 cctagtgccc tgcccacacc aaactatgaa ataccctaac ctctgagctg acccttcagg aaaacttact tgagtggtaa 000880 000881 cccttcttcc ctgaggccag cctcaggtta atacaactgt atactgcagt agcacttttc agtgaattgg ttttgtctgc 000960 000961 agtaagcagg aaaaaccTGC AGTGCCATTC ATTCCCATGA GTGGAAAGTT CTTTCCATTT AGAGCTTAAG GTGTTGTCAC 001040 001041 TTTCTCCAAG AAGCAGGTCT TGCCCTTggc ctggtgtggt ggttcatggc tgcaatccca gcacattgcg gggcggaggc 001120 001121 gggaggattg cttgagccca ggagttcaag accagcctgg acaacaaagt aagaatcagt ctctaaatta aaaaataaaa 001200 001201 GTAAtttttt tttgtttttt tgttttgaga cagagtcttg cactatcacc caggctggag tgcagtggca ccgatctcgg 001280 001281 cttactgcaa cgtccggctc ccgggttcag acgattctcc tgcctcagct tcccgagtag ctgg |
Predicted Small Protein
Name | NONHSAT001690_smProtein_686:838 |
Length | 51 |
Molecular weight | 5584.3713 |
Aromaticity | 0.04 |
Instability index | 80.386 |
Isoelectric point | 10.9032592773 |
Runs | 8 |
Runs residual | 0.0046783625731 |
Runs probability | 0.0264308426074 |
Amino acid sequence | MTQPLLLSHSSPKRRTQLLRSVVHTPVIASPTNQQHPFPSALPTPNYEIP |
Secondary structure | LLLLEELLLLLHHHHHHHHHHEELLLLEELLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |