NONHSAT002042
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT002042 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
562 nt |
Genomic location |
chr1+:30613109..30614454 |
Exon number |
2 |
Exons |
30613109..30613187,30613972..30614454 |
Genome context |
|
Sequence |
000001 taaagccacc tctgTCTGGA AGGTTCTCAC GGGGAGAGAG CTGGTCCTAC CACGGGAGCT CCAGAGCAGA GAATAGCAGt 000080
000081 tccatgaagc tgaaggcctc tccactgaac gctgaaacct caccttcact ggctgcttta taattagcat ttataggtca 000160 000161 ccgtggctat gatggcttct gcaatttttc aggaactttg gccagctcct gtgcagttca aacttgttgg taccactgat 000240 000241 ccttcaactg agcctgcata catgcccagt aggtgccttt tgacatcaga gggccaaaaa ccccaccctc agatgatgca 000320 000321 aatgtcacca ttttctgtac acacatccta tgaaatgcca tgaattccag ctatgcttgt gcagaacgaa cctgttactt 000400 000401 ggttgttccc cactgccaat caccttcccc acaccttaga ccatccactt ccctaatcta tgaatattcc taaggcttat 000480 000481 cttcagggag gcagatttgg gagctgttct ccttcctcct cactctgtgc cctggcaaat aaatcttttc tcttttgcaa 000560 000561 aa |
Predicted Small Protein
Name | NONHSAT002042_smProtein_359:472 |
Length | 38 |
Molecular weight | 4191.7005 |
Aromaticity | 0.108108108108 |
Instability index | 90.7891891892 |
Isoelectric point | 6.68426513672 |
Runs | 7 |
Runs residual | 0.009422266303 |
Runs probability | 0.0312791783381 |
Amino acid sequence | MNSSYACAERTCYLVVPHCQSPSPHLRPSTSLIYEYS |
Secondary structure | LLLLHHHHLEEEEEELLLLLLLLLLLLLLLLEEEEEL |
PRMN | - |
PiMo | - |