NONHSAT002050
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT002050 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
670 nt |
Genomic location |
chr1+:31069662..31079280 |
Exon number |
4 |
Exons |
31069662..31069807,31072039..31072086,31075182..31075316,31078940..31079280 |
Genome context |
|
Sequence |
000001 CAGAACACTG AGAAGCAAGA ATTATTTTAT TTTCTGTCCT TGAGAGAAGA AGACACTTAG CACTCTACAG AACTCAGTGT 000080
000081 GAGAAGAGTA CATGTGATCT GTGGTCGTTG TAAAATATGT CTGCACATCC CTGACACTCA GAGTTCACAA CCCCTGCCCC 000160 000161 CTGCAATCCC CCTCATAAAT CATTTGACTG TTGTTCCCTT CTGCCATTTA TGAACCCTCA ATCTGGGTTG GTTTTCCTGG 000240 000241 GAGAGGAGGG ACATACCCCC TCCCCCATTC TCCTTCCATG CATCTGGGAT GGGCTCTCCC CTTGGCTTCA GTGATGAACC 000320 000321 GTGTGGCCCA GGCTGGCCCT CAGCAAATGT CTGACAACTG AGCATCTAGA TGAACTGAGC CCCCTCCTCA GGCCCCTTGT 000400 000401 GTAGGGAACC GGTGGGCAGA GGCCTCATCC CCTTCTCTCA TCTCTGGTGA GACACCACCA CACAGCCACA TTCCCTGGAG 000480 000481 ATTGGAGTGC CTGCACCCCC TTTTACCCAG TGTCTCCAGA GCTCATTGCT CAGTAGATGG GGCCCAGGAG GGAGGAGGCA 000560 000561 GAGGATGGGG GTGGTCAATG AGAGTGTGGG ACTCCTCCTC ACCTCCTTTC TCCAGGCAAA GCCATCAATC CCTGGCGGGG 000640 000641 AGGAGAGTGA CTCCGCCAGC CCTGCCACAG |
Predicted Small Protein
Name | NONHSAT002050_smProtein_209:313 |
Length | 35 |
Molecular weight | 3733.2723 |
Aromaticity | 0.0882352941176 |
Instability index | 85.5941176471 |
Isoelectric point | 4.12982177734 |
Runs | 5 |
Runs residual | 0.0390915860015 |
Runs probability | 0.042236354001 |
Amino acid sequence | MNPQSGLVFLGEEGHTPSPILLPCIWDGLSPWLQ |
Secondary structure | LLLLLLEEEELLLLLLLLLLLLLHHHLLLLLLLL |
PRMN | - |
PiMo | - |