NONHSAT002067
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT002067 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
621 nt |
Genomic location |
chr1+:31298888..31306684 |
Exon number |
3 |
Exons |
31298888..31299041,31302595..31302729,31306353..31306684 |
Genome context |
|
Sequence |
000001 TTCCCATCTC TTTAGTCATG TCGTAGCCAC CACCTAGGAG CTGGGACTGC CCCCCTGCTC ACCATGTCTG CCCTTCCTAT 000080
000081 CACCCCTCAG CAGGGAGGAA AAGTTGCCTA TCTGTTGGGT CAGATTTCTG AAGACTGATG AGGCCCATTT TCTGatatcc 000160 000161 ttcgagttgg atttcgactg ggttctgcca gtgggatgta tccatgcgag attctggaaC TAACATCAGA GAGAGTCCAA 000240 000241 GCTTCTAACT TTTATCAGCG GCAGTGACAA TAGTCAAGCA GCATTGATGA CAAACGGCAA GAGTTTAGAA AGTACCAGTG 000320 000321 ACGTGCCTGA TAGAATCTCA CCACAAGATG GAAGCCAACT CGTCAGAAGC CTGGAAAGCC CACCCAGCGT GGGACCTCTG 000400 000401 TGGGTCCAGG ATCTTGGAAT GGTATCCCAT GGTTCAATCT TCTGGATTCA ACCACATAAA TTTACCCCAC CCATGTCGTG 000480 000481 GACCCAAGCT TCCTACCATG TATACTTAGC TTAAATGCAA GATAGTACTA TTTTGTTCAT CTTGATTGGA GTGAGAAATG 000560 000561 AATAGGTCCA TGCACATATA TTTCTTTTAC CACAACAAGA TGATGAAGAA ATAAATCCAT A |
Predicted Small Protein
Name | NONHSAT002067_smProtein_347:508 |
Length | 54 |
Molecular weight | 6056.8669 |
Aromaticity | 0.11320754717 |
Instability index | 49.0849056604 |
Isoelectric point | 6.80584716797 |
Runs | 9 |
Runs residual | 0.00954901058444 |
Runs probability | 0.0461736246051 |
Amino acid sequence | MEANSSEAWKAHPAWDLCGSRILEWYPMVQSSGFNHINLPHPCRGPKLPTMYT |
Secondary structure | LLLLLHHHHHLLLLLLLLLLEEEEEELEELLLLLLEELLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |