NONHSAT002286
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT002286 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
736 nt |
Genomic location |
chr1-:33977608..33978343 |
Exon number |
1 |
Exons |
33977608..33978343 |
Genome context |
|
Sequence |
000001 AGCTCAATTG ACACCAGGTA TGACTTGTCA GTCTCTACAT TCTCTCCTGA TGGAAGAGTT TTTTGAGTTG AATATGCTGT 000080
000081 GAAGGCTGTG GAAAATAGTA CAGCCACTGG ACTCAGATGT AAAGATGGTG GTGGCTTTGG GGTAGAAAAG GGAGTCTTCC 000160 000161 TAAACTTTAT GAAGAAGGCT CCAACAAAAG ACTTTTTAAT ATTGATTGGC ATGTTGGAAT GGTGGTAGCA GGTTTGTTGA 000240 000241 CAGATGCCCC TTCTTTGGCA GATATAACAA GAGAAGACGC TTCCAACTTT AGATCTAGCT TTGGCTATAC CATTCCACAA 000320 000321 AAACATCTTG CAGACACAGT TGCCATGCAT ATACACTCTG CAGTGCTGTT AGACCTTTTG GCTGCAGTTT TACAGTAGGG 000400 000401 TCTTACAGCG TGAACAACAG GGCACAATTC TGCAAGATGT TTCGTATGGT TATTGGGGCT GTACCCTTGG CAAAGCCAGG 000480 000481 CACGCTGCAA AGATAGAAAA TAGAAAAGCT TCAGGTGAAA GAAATGACCT GCCATGTTAT TGTTAAGAAG TTGCAAAAAT 000560 000561 ATTTACATAG TATATGATGA AGTTAAGAAT AAACCTTTTA AATTAGAACT CAGCAGGGTT GGTGAATTAA CTAAAGGAAG 000640 000641 AAGACATGAA ATTATTCCAA AAGATATAAG GGAAGAAGAA GAGAAACATG CCAAGGAATC TTTGAAGGAA GAAGATGAAT 000720 000721 CAGATGATGA CAATAT |
Predicted Small Protein
Name | NONHSAT002286_smProtein_218:397 |
Length | 60 |
Molecular weight | 6306.1841 |
Aromaticity | 0.0508474576271 |
Instability index | 47.0338983051 |
Isoelectric point | 5.23150634766 |
Runs | 7 |
Runs residual | 0.0258124708443 |
Runs probability | 0.0219421101774 |
Amino acid sequence | MVVAGLLTDAPSLADITREDASNFRSSFGYTIPQKHLADTVAMHIHSAVLLDLLAAVLQ |
Secondary structure | LEEELLLLLLLLHHHHHHHHHHHHHHHLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHL |
PRMN | - |
PiMo | - |