NONHSAT002344

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT002344

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3943 nt

Genomic location

chr1-:35641981..35647739

Exon number

4

Exons

35641981..35642077,35642920..35643002,35643590..35646224,35646612..35647739

Genome context

Sequence
000001 ATAAAATTAA TGTTTCAGTT TATTTTTCAG ATTACATGCC TTTCTTTATA AGGGATGCTG GCACAGACCC CCTAAAATAA 000080
000081 GCTTTTGGTA GTACTGTACC TTTGAAGAGT GGTGAAGGAT GCTAATGGAT AATCTCCTGA AAGTTGTGGC TTTTGATACC 000160
000161 CTTACTGTGG ACTGTAGAGT TGCTAAACGT TGTTTAGCAA ATAATGTTGC TTAGTTTCAA ATGACATTTG ACTTTCATCA 000240
000241 CTAAAACAGC AATGTACTCA GGGTTGTAAG CTTACTCAAA TAGACTTTCA ATAAGTCTTC AATGTATATA TGATAGTTTT 000320
000321 TAGCCTAATG TGAATTTAAA TAATCTTAAT AGTTTCCTAA AAGTCGATCT GAAACTTGGG GTGGGAAAGG GGAGGTAGCA 000400
000401 ATTTTTGAAG TATTTTAGCC ATTTTTTTCA TTTAAAGAAA CCACTTGTCC CCATTTCCTC TTCTCCACTT TCTCATAATT 000480
000481 TTGTTTTAAG AGGAACACTG GTTGTTTTTT ATACTTCTCC TAATCTTTAA AAACTGCATA TTGTTAAGAC CCCAGTGTAT 000560
000561 TTAATAGGTA TTTTATAAGC ATAGCCCATT GGCTCATGTT AGTGAAACCA TAATCCTCTT TGCTTAGAAC ATTAAACTCA 000640
000641 TAAGAAGTAC TACAAACCCC ACCACTCTTT ATAGATGTAT TGTACCACTA ATATAAACAG CTAAAAAATG GGGAAATTGT 000720
000721 AATGTTACGC CTGTGCAATT TTTAAGTGGC ATATTATGGC AGATTAAAAT TTAGATACTT GGCTTTTCTT GGGCAAGCCA 000800
000801 CTAAGTTGTG GCGGAATGTT TTCTGGTGTT CTTGGACTGC AATTATGCAC TATTAAAGTA GTGGCCTGCT ACATAACTGC 000880
000881 ATTTAGCCAG CATTTCTGCA GTGCGTAACT GTGAGGAACG TAGTACCGCA AATGGCAATG GACATTAGGA CCCGGATGTA 000960
000961 GTATTCCTGC TTGCTCCAAG ATTCTCATTG CCGACTGCAT ACAGGTAGGT AACAAGCAAT ATAATCTAAC TTGGTGACTT 001040
001041 GTATGTACTT TTATTCCGTG GGCATTCTGG CATCACATTT CTGACAATGA AATTACAGTG CAGCACCTAA CACTTGTATG 001120
001121 GTAAAGCTTT TTTAAAAACA TGGGCTTCAT GAAAACACCA TTGTTACTAA CTTGGGCTTA GATGGGAATC TAATGTGAAT 001200
001201 AGTTCAAGTT ATGGGACTTG TCTAAATGTG TCTATACTCT AAACCTGGGG GAAGGTGGTG TGGAACATTG ACTTGACTAC 001280
001281 AGTCGAATAC ATGTTGGGAA TCATTCCCAA TCATAAGACA TCGTCGTTTC TGTAGGATGA CTGCATATGT TCAGAGTAGC 001360
001361 TTTTTGAATT TGGTTCCCTT AGCTTTAGGG ATGTGATGTT ATAGTCCAAA ATGTTTACAA GAAAACCTAA GTCTTCAAAA 001440
001441 GCACAACTTT TGTTGCTTAG GACTTTGCAT CAACTGTTGT TCCAGACCTC ACTTCAACTT CTTGGTCTCT GAACTGGTTT 001520
001521 TAGCTAGCAT GCATGAGAGA CAGTTTTCAT GTATAATGTT TCTGCTCTGT AACTGGAAAG TGGTTTACTT TGCATAAATG 001600
001601 CTGATGAAAA CTTCATGACT ATGAGACTTT TCTTCTGTGT ATCAAGAAAA AGCTTGCTCG TTGGCAAGCA ATTCACAAGG 001680
001681 TGGGGACAGA CTTGTACTTT AACATGTAGT CCATTCAAGC AAACAACTTT GGACTCTACT GATAGATGAA AGAGCAAATG 001760
001761 ATGACTAGTT TAGCCTCTGC ATATCAACAA TATAATGCAG ATCAAGTATA ATGCTCAATA TTAGTGACAT GAGTATCACT 001840
001841 AAATTACATA GAACCCTGAT GGGGTTTCCT GTGTCGTAAT CCATTAAATC GGTGGCCAGT GCTTGCTGCC GTGGTTTAGT 001920
001921 GATTGGGTGT TAGAAATAAA AACTCAGGTC TATTTCTTAC CAGTCAGTAA CAATTTTTAG AGAATGTACT TGGTATATAA 002000
002001 TATATGGACT TCAGGAACTT TATTGGGGTG GGGGGTTAAT TTTGCCTTAC CCTGTTCACT TTCAGATGAT TAGGCTTTTG 002080
002081 CACTTTAGAA TGAGAAACTT GTGACGTTAG TGTGTTCTTA CTAGCTTTAA TTTGTATGTA GCAATGAATT GTGAATCTTA 002160
002161 GTGCAGTGGG TTTTTTTAAA AAACTCAAAA AGCTGGGAAT TAAGTGGTTT CAGTAATAAT GCTATACCGA GGTGCTTGCA 002240
002241 TTGTATTTCA TAATTTTGTT ACAAACCAAA ATTATTTTTA ATGAGAACAG TCTTGGGTTC AGAGGTGTGA TGCCAGAATG 002320
002321 TATTTTCGTA CTGTTAGGCC CTTGGAACAG ATACCGGTGC TTTCTGAAAG ATGAAAGAAA TGCAATGGGT GCTCTTCATG 002400
002401 CAAGGTTGCA AACCTACCAA GAATGCATAA TAGTCTCACT TTTCCCCAAT AAAGAGATGC GTGTGACTAG TTTTGGACTT 002480
002481 TTAACCTTAA TGGGGGTTGC ATGTCTCCTA TTGTTAATCA TTGTCAGCTG CAGTGACATG ATCCACAGTC CTGCATTTAC 002560
002561 TGCCTTTCAC TTAATGATTT TGGACAGGTT TTAGAGAGCC AGGATGTTGG TCTGGGCCTT TATTTGGTTT TGGCTTTAGC 002640
002641 TGATAATGTT TTAGTGATGT CAGCTAGTGC AGTTCTCAAA TGGCTGCCTA TTAGGGAAAG AATTCAGAGG ATTTGACTGC 002720
002721 TCCTAATCAT CTGTCATTGC TGCTAGATAA TGATTGGCAA TTTTTAAGAC TCAACTGGAA ATCTCAACAG TTGCTGGTAA 002800
002801 ACCATTAACC ATAAAAACGT TGCTTTTGAA CACCAGTGCT GAAAAAAATA TTTTTTTTTT TTTTTTTGAG AGTGAAAAGG 002880
002881 GCTTGGACTT AAGATAGGAC AATGTGGAGA ATGGGGGGAA GAATGCAAAA CGATATAGTA TCCCTTATGG ATGGTACATG 002960
002961 TGCAACAGGG AACTCTTACT TCATATACCC TTTGCAGTAA TCATTCAGGG AGGAAGAAAA ACCTGGAACT TGAATGAAGG 003040
003041 CTGATCTTTG TTTTGTGCAC TGTGGCCCTG CCAGGCATAT AGTGAAGGTG AATGTCTTCT CCCTCAGAAA AAAATTGGTT 003120
003121 CCTTGCTGTC CCAGTAAGGC ATAGCTTTTC CAGCCCTAAC TTTAAAACTC AGTGAGGACT TAGATGGGAA AGAATGAGGT 003200
003201 AAATACAAAG GATTGCAGGA CAACAACTAC AGCGTTGTGT ACTGTGGGAA GGGGAGTTGG GCACTCTTGG AGGACTCCTG 003280
003281 CTGAAGGTGG TCAGCCTGCC TGACAATGGA AGACATACTT GAATGGGGAG CAGGGTATGT GCTTTCATAT GAAAAAAGAG 003360
003361 CTGATGTTAA AACTCATTTG GTGAGGTCAA CGTTGTCACA TACCTTCACA TAAGGGATAG TATATTTTGG GTTGCAGTCA 003440
003441 AACTTGTGCT CAGACTGGTG AAACTGAGAG TCAGGCTTTT ACATTTTAAA GAAAATACAG TTTTCATTCT AATTCAGGTG 003520
003521 TCTACTTATT TTATGTAAGA ATAATTTTAG ATTTCCCCCC CACCATGAAG TTTCTTCCTA TTTTTTTATG CTGTAACTTA 003600
003601 CCCCCAATCT TTATCTCTGG ATTTTTACTC TTTAAATTTT GAAGTTGACT AGCATTTTCA AACCTTTATT TTATACCCTT 003680
003681 GTCTTTTATA TTAACTTTTT CTTATTATTC TTTAGGTAAG AATGATTGAT GTTGGCTGAT ATTGGAGTGC TCATTCACAT 003760
003761 GAAAGGTGGA TAGATACTTC TCAAGACATC ACACAGCGTG AGTCAATCAA GGAGGGAAGC CACAAGCAGA CTGACAACGT 003840
003841 TTCTAGAGCA GGATCAGGTG AGCTGTGTCC AGAAAACCAA CGAGAAGGAG TGGAAGGAGG AATGAACGTT TCATTCTCGT 003920
003921 TAATAAAGGC ATTATCCTAA TTA
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Predicted Small Protein

Name NONHSAT002344_smProtein_2309:2593
Length 95
Molecular weight 10796.8975
Aromaticity 0.106382978723
Instability index 49.7255319149
Isoelectric point 7.66705322266
Runs 12
Runs residual 0.00115633672525
Runs probability 0.0489607254314
Amino acid sequence MPECIFVLLGPWNRYRCFLKDERNAMGALHARLQTYQECIIVSLFPNKEMRVTSFGLLTL
MGVACLLLLIIVSCSDMIHSPAFTAFHLMILDRF
Secondary structure LLEEEEEELLLLLHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEELLLLLEEEELHHHHHH
HHHHHHHHHHHHHLLLLLLLHHHHHHHHHHHHLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHH
HHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTT
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