NONHSAT003412
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT003412 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
607 nt |
Genomic location |
chr1-:55838383..55838989 |
Exon number |
1 |
Exons |
55838383..55838989 |
Genome context |
|
Sequence |
000001 TATCACAGAA CTCCTTCACT TTCATGACCA CACCCTAATA ATTGTTTTTT TAATGAGCTC ATTAGTACTT TACATTATCT 000080
000081 CCCTGATATT AACAACTAAA ACTCACACAA ACACAATGGT ATGAACTATT TTACCTGCCA TTATCTTAAT TTTAATTGCT 000160 000161 CTTTCATCAT TATGTATATT ATATATAATA GATGAAATTA TAACCCCTCC CTTACCATCG AAACTATAGG ACACCAATGA 000240 000241 TACTGCAGCT ATGAATACAC AGATTATGGA GACCTAAAGT TTGATTCGTC CGTAATTCCT ACAACAGACT TAAAACCAGG 000320 000321 AGAACTGTGG CTACTTGAAG TTGATAATCA AGTAATCCTC CCCATAGAAA TATCAATTCG CATCAATTGC ATCAGAAGAT 000400 000401 GTTCTATATT CATGAGCCGT GTATCATTAG GCCTAAAGCC AGATGCAATC CCAGGACTTT TAAACCAAGC AACGTTGACA 000480 000481 TCTACATGGC CAGGTCTTTA CTACAATCAA TCCCCAGAAA TCTGCAGATC TAATCACAGC TTCATGCCCA TTGTTCTTGA 000560 000561 ACTGGTACCT CTAAAATGCT TTGAAAATTG AGCAACGTCT ATATTAT |
Predicted Small Protein
Name | NONHSAT003412_smProtein_398:532 |
Length | 45 |
Molecular weight | 5232.1841 |
Aromaticity | 0.0909090909091 |
Instability index | 71.3138636364 |
Isoelectric point | 10.0479125977 |
Runs | 5 |
Runs residual | 0.0494652406417 |
Runs probability | 0.0449567214273 |
Amino acid sequence | MFYIHEPCIIRPKARCNPRTFKPSNVDIYMARSLLQSIPRNLQI |
Secondary structure | LEEELLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHLLLLLLL |
PRMN | - |
PiMo | - |