NONHSAT003499
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT003499 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
516 nt |
Genomic location |
chr1+:58417944..58426519 |
Exon number |
4 |
Exons |
58417944..58418080,58422201..58422390,58425625..58425776,58426483..58426519 |
Genome context |
|
Sequence |
000001 gggaagagtc atctttgctc ataaagacaa tgggggatga tgaagcaata gaaagaagaa actgggttcc tggtgacttt 000080
000081 gttgagcaca gccacccttc ccatccagaC AGCCCAACAG CTCCACTCCT CCTTCCAgtc agcctcctgg ggcaggcaca 000160 000161 gaagggtgga gggaagacct cattaaataa agacatccag cacaCCAAAA CAGGCAGAAA GCAGACATGA TAACGAGATT 000240 000241 GCCACCTATT TACCTTCTTG TAACCATAAG AATGAGGGAA GCTTCATTCC GACGGAGTTC GACCAAAATA GAGAAGAAGT 000320 000321 TGTAAGGGCA ACCCTTGCAT AAAAATATCC ACTCACCAAC TGTTCACCAA CTGTTCTTCC TCTTGCTGGC ATACCTTATG 000400 000401 CAGCATCCTC AGATGCCAGA GCGCGTTTCT GCTGCAGCCT CCACGATGCC TGGGCTGATA GCAATCAGGT CCTGCTATGg 000480 000481 cctaagccat gcaggcatga ggagaacaga ccccag |
Predicted Small Protein
Name | NONHSAT003499_smProtein_29:229 |
Length | 67 |
Molecular weight | 7182.9156 |
Aromaticity | 0.030303030303 |
Instability index | 49.9712121212 |
Isoelectric point | 6.90045166016 |
Runs | 11 |
Runs residual | 0.0160587915079 |
Runs probability | 0.0411025999261 |
Amino acid sequence | MGDDEAIERRNWVPGDFVEHSHPSHPDSPTAPLLLPVSLLGQAQKGGGKTSLNKDIQHTK TGRKQT |
Secondary structure | LLLHHHHHHLLLLLLLEEELLLLLLLLLLLLLEELLEELLLLLLLLLLLEEELLLLLLLL LLLLLL |
PRMN | - |
PiMo | - |