NONHSAT003825
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT003825 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1280 nt |
Genomic location |
chr1+:68962359..69004310 |
Exon number |
3 |
Exons |
68962359..68962454,68995008..68995162,69003315..69004310 |
Genome context |
|
Sequence |
000001 GGGGAGGCAC AGGAGTCGCT CCTCATAGCG AGTCTGGTGC GGCCTACGCG CGGCGCTTCC TTTCGGACCT GAGGCCCAGA 000080
000081 CCCTCAAAAT AGAGGGAGCG GATAAGGAAG TCATAATATT AATGAACTCT GAGGACTGCT ATGAGGATAA AATGGGATCA 000160 000161 TCATCATCAT CATCATCACT TACTCAATGC GTACTACAAT CCTGGCACTC CTCTAAGTGT TACAAATATA TTAACTCCAA 000240 000241 CAATAACTCC AGAAGAAATC CTAGTATTGC ATAAGTGATC TTCATGAAGC TTCCTATTCC CTGTGGAGTT TGGAAGGAGA 000320 000321 GGCATTCCTG TAGGCTTCTG CTGAGAAGGG AAGAAGAGTC TTCCTGCTTG GACACTGGGC TTCTGAAAAG GCCATGTGCT 000400 000401 CTCCTATCTC ACAGTTTTCT TTCTTTTACT TTTTTTGTTT GTCTTTTTTC TCTTTTTTTA TTCTTTTTTT CTTACCTCAC 000480 000481 AGTCTTGTAT GTGTTTTGAC TGTCACAAGA ATGAGCATTG GATGTGGTAG AAAAAATTCT TGGATTAGTG CCTCTCATTA 000560 000561 GTCCCTAAAA ATACATATGT ATCTGGCCCC AACTCCTGGT GACTCTCTAA GCTTATGATG CATTTTTTGG TATGTTTTGT 000640 000641 ATACAGTTTT GAGCTTCCGC AATGATTTTT AAAACAGGAC AAAATCCCAT ATGAACATTC TGTTATACTC CATTAAATTG 000720 000721 TCAATACCAG AGATACAGGA AAATTATTTT CTCATTCTAA CTTTATATAC CCAATATCTA ACAAAGCAGC TGCAAAATGG 000800 000801 TTGCTACTCA ATAAATATTT GTTGAATGAA TGAAGGAATG AAAAGCCAAA TGTAATACAT AGAAAAGTTG ATTATAAATT 000880 000881 CTTTGGTACA AAATAGACAG ACAAAACATA ATCTAGGAAA TATGCACCCT GAGAAATTGC TATCATCATC TTAATACCTT 000960 000961 ATAACAACGA AAGTTCTTAA ACTGGTCCCC TTAATACCAT TGTGTTTATT TTCTGTATGT TTATACTTTT ATGCTTTGGT 001040 001041 TTCATTTTCT ACTTATTAGT TAAATGATTA TGAGAACTGT GGGGATAAAT TTAAAACATT ACTGTGTTTC TATAGAGAGT 001120 001121 TCTGCTGTAA TGCAGTGATT ATGAAATGAT CTCAAATCTA TTCAGAATTA TTAAAAGGTA CAGTTCAATA AATATTTTTA 001200 001201 TTTTTGTTAA TTCTTCCCCA AATCACATTA AAACGATCCT TTTGCACTTA AAAAAAAAAA AAAAAAAAAA AAGAAAAAAA 001280 |
Predicted Small Protein
Name | NONHSAT003825_smProtein_140:277 |
Length | 46 |
Molecular weight | 5326.0603 |
Aromaticity | 0.0666666666667 |
Instability index | 40.1777777778 |
Isoelectric point | 7.10406494141 |
Runs | 8 |
Runs residual | 0.0155303030303 |
Runs probability | 0.0235934463876 |
Amino acid sequence | MRIKWDHHHHHHHLLNAYYNPGTPLSVTNILTPTITPEEILVLHK |
Secondary structure | LEEEELLLLLHHHHHHLLLLLLLLLLLLLLLLLLLLLHHHEEELL |
PRMN | - |
PiMo | - |