NONHSAT003931
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT003931 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
480 nt |
Genomic location |
chr1+:73545487..73557932 |
Exon number |
3 |
Exons |
73545487..73545634,73549124..73549261,73557739..73557932 |
Genome context |
|
Sequence |
000001 CCTCCCACCC TCCACCTCCA GTAGGCCCCA GTGTGTGTTG TTCCCTTCTA TGTGTCCATG TGTTCTCATC ATTTAGCTCC 000080
000081 CACTTATAAG TGAGAGCATG TGATCTTTGG TTTTCTCTTC CTGCCTTAGT TTGCCAAGGA TGATCACCAG GAATGCTTGT 000160 000161 GATTTTTTTC ACATTGATTA TGTATCCTGA GCCTTTGCTG AAGTTGCTTA TCAGCTTAAG GAGATTTTGG GCTGAGACGA 000240 000241 TGGGTTTTCT AAATATACAA TCATGTCATC TGCAAATAGA GACAATATAC TTGAATATTG AAATCTCTCT TTAAGTTTGG 000320 000321 AAAATTCTGT TATTATCCTT TTTAATATAT TTTCTACCCT AATCTCTCTC TCTACCTCCT CTTTAAGGCT AATAACCCTT 000400 000401 AGATTTGCCC TTTTGAAGCT ATTTTCCACA TCTGGTAGAT ATGCTTCTTC ATTTTCATTC TTTTTTCTTT TAACTCCTCT 000480 |
Predicted Small Protein
Name | NONHSAT003931_smProtein_152:313 |
Length | 54 |
Molecular weight | 6330.6289 |
Aromaticity | 0.132075471698 |
Instability index | 95.4622641509 |
Isoelectric point | 5.54888916016 |
Runs | 9 |
Runs residual | 0.00954901058444 |
Runs probability | 0.0234940823177 |
Amino acid sequence | MLVIFFTLIMYPEPLLKLLISLRRFWAETMGFLNIQSCHLQIETIYLNIEISL |
Secondary structure | LEEEEHHHLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLHHHEEEEEEEEEELL |
PRMN | HHHHHHHHHHHHHHHHHHLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLL |
PiMo | TTTTTTTTTTTTTTTTTTiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooo |