NONHSAT004068
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT004068 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
757 nt |
Genomic location |
chr1-:78636165..78636921 |
Exon number |
1 |
Exons |
78636165..78636921 |
Genome context |
|
Sequence |
000001 ATATAAGGAA TTTCTCTTGG AACTGGCTTC TAACAACATT TATGCATGCA AACAAAAGCA TTGTAAATCA GGCTTTTCTA 000080
000081 AAAGAGAGGT GCTCAAAGTC AGCATGCTTG GTTACTGGTA TTCTTAGCAG GACCTTCTGT TCTCTTTCAT TCCCAGTCAC 000160 000161 TTTCTGACAG CTTAATCTTT CTAAATCTTG CTTTGGATCG CTTGAGCTTC TAGGAAGTAC TTTGGATTAC TGGAATTACA 000240 000241 GACTTCATTC TAAAATTTCT TTTTATAAGC TCTTTTTATG TATTGCTAAT CATATTACAG AGAGTAATAT TGATGCCTTA 000320 000321 TTTCATCATA CCTTTTTAAA TCCGAGGGTT TACTGGTATA TGCCTATTAG AAAAATTATG TCAGTATTAC TGAATTTTAT 000400 000401 TCCCACACCA CTGTGGTCTT GTTACCTTAC TGACTATGGA GAGTTTGGTA ATATAACCAG ATAGATTTTC AGGATATGCC 000480 000481 CAGCTTTATT CTACCTCATT TTAAAGTTTT TGGATTTTTT GGCTATCTGG AACTTTCAAA TAGGTTTTTG TGAATATTTT 000560 000561 TTATGCAACA AAGTTACTGA GCAGCTTGTT CAGATGTGTT CAATACATCA GGTGGAATTT CAGAAGCTTA TTCTTCCCAT 000640 000641 CAGTTCACAA ACATTTTATA AATAGTCCAG TGCCCTATGG TTTAACAGAA AATATGTCCA TTGTGCAGAA CCATATTTTC 000720 000721 AGACTATATA CACAAATGGA AAGATGGGCC ACTTCAT |
Predicted Small Protein
Name | NONHSAT004068_smProtein_41:166 |
Length | 42 |
Molecular weight | 4536.3255 |
Aromaticity | 0.0975609756098 |
Instability index | 55.4634146341 |
Isoelectric point | 9.49884033203 |
Runs | 9 |
Runs residual | 0.0435433188688 |
Runs probability | 0.0428860232782 |
Amino acid sequence | MHANKSIVNQAFLKERCSKSACLVTGILSRTFCSLSFPVTF |
Secondary structure | LLLLHHHHHHHHHHHLLLLLLEEEELEEELLEEELLLLLLL |
PRMN | - |
PiMo | - |