NONHSAT004283
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT004283 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1120 nt |
Genomic location |
chr1-:87594509..87595612 |
Exon number |
1 |
Exons |
87594509..87595612 |
Genome context |
|
Sequence |
000001 GACCATCACC TCAGAAAGCA GCCCCGCTGG GAGGTCCACG GAGCAGTTCG CCGAGCTGTG CACAGGCCCT TTATTTTCCA 000080
000081 TCTGTCAAGA AAGGAAGCTG CCTGTTGCTT ATTTCCTCCT CCCACTCTTC TCCCTTCCCG CCAGCAGACT CTTCCACTTT 000160 000161 CAAAATATTC TGATGGGGGA TCACAGGAGT TTTCCTCAAA CAAGATCACT TGGGGTCAAC TACTGAGCAA CTCCCAGCCT 000240 000241 CAGCCCCACC CATTCCCTCA CCCTCCAGCT TGAGCAATAG CTCCAGTTAG TAAAGCAGTT GGATCAACAG GACAACAACC 000320 000321 AAAAGTGACC TTCTACGTCC TAAAGCCCTT GCCTGACACC ACCTCTTTTT TTTTTTAAAT TATTCAGGGG CCTTTTGGGG 000400 000401 ACCCCCAGTT GAGCTGTATT CTGCAGAAAG AACTTCCAAA CGAAAGGAAT AAGGCATTGT TTTACCAAGA GCCTTTTCTC 000480 000481 CCTCAAGAAA CACAATGTAA ACTAGGAAAC TTGCACTTTC TTTTACCTTT GGGTAGATGA GCAGAAGGGA AGAGTTACTA 000560 000561 CCCAGGGTGA GGTCATTCCT CCATGGTGGT AGAATATCTG GTTCTTTCAG TTTCCCCATG GTGCTGGCCT CACAATAGGT 000640 000641 GTTCATGAGG TGCAGGCTAA TTGGGTGAGT GGATGCAGTG CTCTGATGGA TTTATTCAGT GTACAAGATT GCAAAGCCAT 000720 000721 GTGCCAGCAA AGGCTTAACC ACCCCACCCT ACCCTTCAGA CCAGCCCCAT AGCTTTCCAT GTCCCTGTCT GCCCAGCCTC 000800 000801 AGGCCAAAGC AAAGGCAGGG ATCTGAGCTG TACCCACTGT GAATGCCCAT CTCCTGACCC CTGTGCTAGT GTCTTGTCCC 000880 000881 TGCATGCCTC GGCTGTCTTC TCTCTGGACT ATGATTCATG GCAGATATTA AAAAGGAAAC AGCATCCTTC AATTCTTTCT 000960 000961 ACCATTTCTC TTATCTTTAA AGGGTTCTTA TTAAGCAGTA TCTTCAAACT TATTTATGTG ATGTCATGCT AGGAAGCAGC 001040 001041 GTTGTCAATG TGCCACTTTC CATGAGCACT GAATTCAGTA AAAATAAAAG CCAAATAAAT GATAAAAAAA AAAAAAAAAA 001120 |
Predicted Small Protein
Name | NONHSAT004283_smProtein_536:637 |
Length | 34 |
Molecular weight | 3749.3297 |
Aromaticity | 0.0909090909091 |
Instability index | 82.9363636364 |
Isoelectric point | 11.8239135742 |
Runs | 7 |
Runs residual | 0.0279973649539 |
Runs probability | 0.0379791556263 |
Amino acid sequence | MSRREELLPRVRSFLHGGRISGSFSFPMVLASQ |
Secondary structure | LLLLHHHHHHHHHHLLLLLEELLLLLLEEEELL |
PRMN | - |
PiMo | - |