NONHSAT004399
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT004399 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
712 nt |
Genomic location |
chr1-:91070014..91089795 |
Exon number |
3 |
Exons |
91070014..91070341,91075695..91075910,91089628..91089795 |
Genome context |
|
Sequence |
000001 ATACAAAAAT GCACTTTAAA TGGGGCTATT CTTTTCCAAG GAGAAAAAAA GCGGGGGGTG GTGGTATTCT TTTTCAAGCA 000080
000081 AGCAATCTCT TGTAAAATTC ACTTTGCAGC TTCTACCCGA ATCATATAGC AAGATTTCCT CATTCGCCAG ACTGTGGAAA 000160 000161 TAAATCAATC ACCCATTTCT TTCAAAAAGT CATTAACACA TATTAACAAA TATTAGATAT TTAGGGACTC AGGGATAAGG 000240 000241 ATGAAATTCA AAAAGGAAGC TATGCTCAGA TGCTGAGCCA TTTCTGACAC TTTTGGCATT CTTTCTTGCT TGGACTTCTA 000320 000321 CTAGTAAATT TTTTTGTTTA GCCACCTCAT TTTGGATGTT TGCATACAAT CCAGTAAAGT GGCACTATCT AGAAATTTTA 000400 000401 TACTTTAAGA CCCTGAGTTA CTCTTTACAT CCAAAAGAAC CAAAGTCATG AGATTAAATT AAAAAAGGGT TTGGTAGATC 000480 000481 CAGAGAATTA TTAGCTGTCA GTGTTAGGGA GAATAGCATT AACATTTTAT GGGGTATTTC TACTTTATGC CTATCACCTC 000560 000561 ATATACTATA ATCTCATTTC ACCTTAATAT ATATAGGTAT GAAGTATATA TTTATATATG TAATATATTT ATACAAGTAA 000640 000641 TATATTAATC CCATAAAAAG GTATAAAATA AAAAATAACG TATCTTCACT CCATCATCTC TCTTCCCTTT GT |
Predicted Small Protein
Name | NONHSAT004399_smProtein_8:94 |
Length | 29 |
Molecular weight | 3167.6877 |
Aromaticity | 0.178571428571 |
Instability index | 56.0035714286 |
Isoelectric point | 11.1659545898 |
Runs | 5 |
Runs residual | 0.0246478873239 |
Runs probability | 0.0137078254725 |
Amino acid sequence | MHFKWGYSFPRRKKAGGGGILFQASNLL |
Secondary structure | LLEEELLLLLLLLLLLLLLLHHHHLLLL |
PRMN | - |
PiMo | - |