NONHSAT004573

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT004573

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1807 nt

Genomic location

chr1-:94614544..94620385

Exon number

2

Exons

94614544..94616071,94620107..94620385

Genome context

Sequence
000001 ACCATTTTTT TCCGAGAATG AATAGCAGAA TTTCCCTGTA TAAAAAGTCC AAGAATAGAA GCCAATTTTA AATTAAAGCT 000080
000081 AAAATAGTAT GACTTTTATT ATTCTGAAAA TGTTGTCATT CCCCATTTCC AAAATAATAC AATGAATAAT CAGAAGAGCT 000160
000161 GTATCCATGT TTTTCTTTTA GGAGACTTTA ATACAAAATT ACCGTGTACT TCATCTACAA TATGTCTTCT GCTGCTGATC 000240
000241 TAGATctgag ctgtccgata cagctgccag aagccacagG TGACGTTATA TTCCTATTCG AAGACCAAGA GCTCAAAACA 000320
000321 TCATTCCTCC CCCAAATGAA AAAATGTCTG GGAAAAATTA CTAATCTACT TCTCTGAAAC CCATTTGGGA AGCTGGCCCA 000400
000401 ATTCGAGTTC TATACTCAAA AGGCAAACGT AAAGACTAAA CCTGTAAGTG TGCCTGTATG TAGATGACTT CTTACAAGAC 000480
000481 CTCCTAATGA GAGTAATGGC AGAAATAGGG GAAATGAAAA TTAAGACAAG TTTTGCAAGT GTTATTCCAA AGAATCCAGA 000560
000561 Atatttccat tttgcccatg gtgaaactat ccaaggaagg ttaagtaatt tggattggtc aggatgtgaa cctaggccag 000640
000641 tctgactttt aagcctgtga tttttctgtt atcccatgAC ATGGTGTACA CTACAAGAAA TGCTAATCTT aataacatag 000720
000721 ctacctgtat tgagagctca ttaggtccgg tactgttcta agcactttgc ttctatctct cactcaGCAT ATTTTAGTGA 000800
000801 GCTCTTTATT GATTTACAAG ATTATGCATC TATGAACTCA GTCACACTGG CTATTAATTA AATTCCCTTC AAGTTTGTAA 000880
000881 AAAATTAATT GACATTTCAT TCTTTTTTCA GAAGACACCA GGTTTTTAGC CTTGGATCAA GATGTCTCAA AAAAAATTCA 000960
000961 GTAAAAATCT AGATCTTGCT CAGCTCCAAA TTCTTGTACT GCTTTCAGAG TACTGAGATC ATTGTAGCCC AAACATGCAA 001040
001041 TGGCATTTTA TAAGCCTCTT GAACTCtgag gactaagctc tgattttttt taatcttgtc caaattccta tctaaggggt 001120
001121 ctggggagtc atgcactaca aaccataaat tctcatcaga tgggttttat ttaaccctat atatcatgac ttacttgcca 001200
001201 acctgactct ggcataacat tatcagacaa ggaagaaaat caaaatattt taccccaaaa catgtttatt tgccatatct 001280
001281 tgaaatggcc ctgcaaagct gtcttttgtg ggggaaaatt tgcctctgta aagaatctct attaacataa ctagatcttt 001360
001361 ttcttccagg ccctcccaaa cctaaggaga ttaactaaaa gtctagcact tcttaaagat ctgaatagga aacatttcaa 001440
001441 ctattatctc taagggcagc cactataaga cttcaaaaga accttggtct ccacaatctt ttatcttaac ctgaaccttt 001520
001521 cccttctatc aatcccaggt ctttagacaa actcaaccaa ttgtcaatca gaaaatattt aaattcacct gtagcctgga 001600
001601 agcccctgct ttgagttgtc ccatccttct agaccaaacg aatgtatttc ttaaatgtat ttgattgatg tctcatacct 001680
001681 ccctaaaatg tataaaacca agctgcatcc ccaactacct tgggcacatg ttctaaggac ctcctgaggg ctgtgtcatg 001760
001761 ggccatggtc actcatattt ggctcaaaat aaatctcttt gaatatt
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Predicted Small Protein

Name NONHSAT004573_smProtein_221:376
Length 52
Molecular weight 5627.5681
Aromaticity 0.0588235294118
Instability index 47.1607843137
Isoelectric point 4.38543701172
Runs 7
Runs residual 0.0169869928169
Runs probability 0.014194867136
Amino acid sequence MSSAADLDLSCPIQLPEATGDVIFLFEDQELKTSFLPQMKKCLGKITNLLL
Secondary structure LLLLLLLLLLLLLLLLLLLLLEEEEEELLHHHHLLHHHHHHHHHHHHHHLL
PRMN -
PiMo -