NONHSAT005030
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT005030 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
391 nt |
Genomic location |
chr1-:109911100..109912211 |
Exon number |
2 |
Exons |
109911100..109911430,109912152..109912211 |
Genome context |
|
Sequence |
000001 CATGTGTTTG ATGATCTCAG AGGCTCAGTA TCCTTGTCCT GGGTTGGAGA TAGCACTGGG GTGTGTTGAG GGACTGTGGT 000080
000081 GCCCATGGGC TCATGGTTGT TCATCTGTTG GTCCCTGCCC CTGCCACAAA GGAGGTACTG CCAGGATTGG GGGAATGGAA 000160 000161 GGAGGATCAG TCAGCTCCTT ATCCCTCCTG ATATACAGCT GGGCTCCCAC TAGGAGGACA CGCTGAGGAT ACATTGGCCC 000240 000241 CTGGTCTTAA ATCAGGACTT GTTGCCTGGC TGTCTTATTA TCCTGCTTGA ACAAGAGCAG GGGCAACATC TCCTGCCCCC 000320 000321 TGGTATTCCA TAATGCATGT GTCATAGCAT TGAGGCACAT GATAGTTATA TTAGAAGCCT AAAGAAATAA A |
Predicted Small Protein
Name | NONHSAT005030_smProtein_92:190 |
Length | 33 |
Molecular weight | 3459.9621 |
Aromaticity | 0.0625 |
Instability index | 68.371875 |
Isoelectric point | 4.83099365234 |
Runs | 5 |
Runs residual | 0.0353954081633 |
Runs probability | 0.020279102632 |
Amino acid sequence | MVVHLLVPAPATKEVLPGLGEWKEDQSAPYPS |
Secondary structure | LEEEEEELLLLHHHHLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |