NONHSAT005058
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT005058 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
450 nt |
Genomic location |
chr1-:110228321..110230409 |
Exon number |
2 |
Exons |
110228321..110228730,110230370..110230409 |
Genome context |
|
Sequence |
000001 CTTGCTGCGA CCCCGCCCCT CGGCCCGCCA CAACCCGAAA TGAAGTCACA CCGTGATATG TGACCCATGG TACAACCTCC 000080
000081 ACGAGAACAA TGTCCAACCT GCCAACTTTC TTCTTTCAAG GTAGAAGGAA GACTTTCAAA AGAGTTGTGC AATGGATTAG 000160 000161 CCTGGGGTTG ACTGCTTTAA AGGATATTGC AAATAATAAT GGACATATGG AAATAGATGA TAGACCTTTA ATGAGAAATC 000240 000241 ATTTTGCAAT GTAAACCAGG CTGTTGTGCT GCAAAAAAAG TAGTTTTTTT GTTTTGTTTT GTTTTGTTTT GTTTTGTTTT 000320 000321 GTTTTTTGTA AATTAGCTAA AACATTGTTA GGACTCCAGA GGATGAACCC AGTATATCAA AAAAGTTTCA AACCACCTGG 000400 000401 ATAATGTGTG GTTTGGGGTT GAGTAAACAG GTAGACTTCA TCACATCCCT |
Predicted Small Protein
Name | NONHSAT005058_smProtein_89:253 |
Length | 55 |
Molecular weight | 6365.3569 |
Aromaticity | 0.111111111111 |
Instability index | 40.3 |
Isoelectric point | 10.8779907227 |
Runs | 7 |
Runs residual | 0.0330623306233 |
Runs probability | 0.0199989905872 |
Amino acid sequence | MSNLPTFFFQGRRKTFKRVVQWISLGLTALKDIANNNGHMEIDDRPLMRNHFAM |
Secondary structure | LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLEEEELLHHHHHHLLL |
PRMN | - |
PiMo | - |