NONHSAT005193
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT005193 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
933 nt |
Genomic location |
chr1-:112043132..112045709 |
Exon number |
2 |
Exons |
112043132..112043981,112045627..112045709 |
Genome context |
|
Sequence |
000001 CTGCTTATCT TTACCCACGC CTCCATCATG TCCTTGCTGG CCATCGCTGT GGACCGATAC TTGCGGGTCA AGCTTACCGT 000080
000081 CAGGCTGCTG TCAGGAAGGA CAGTTTAAGG AGCAATGGGG ACTCTTACTC TTACTGTCCT TTAAGGTCTC TGAAACACTT 000160 000161 CAATACAATT TTGTAACTTC ATTGATTCAT TTAACTCAAA TACCAAGTAT GGATGCCCAT GAAGATAGAG AAGCAGGAGC 000240 000241 AGGCACAGGT AGAGGGGAAG TGTCGGGGAG GCATAGTATA ATTTATGAGA ATCTGCACAA CAGCCAAACA GAACAGTGCC 000320 000321 AAGAACAGCA GGCAAGCTTG CTTTGAGAAT ATCATTTCTC ACCAGGCAGA CAATCCTAGG AGACTTAGAT GAATCTCAGC 000400 000401 TCCCAGGAAC TGAATAATTC TTAGGCTTAC ACCTTATTGG GAACAGAAGG AGTAAACTGA GTTCAAGGGG GACTTAAACT 000480 000481 GCTGAATTCA CCTGTGGATG TTTTTGAGTT AAAAAAAAAA AGAAAAAGAA AAGATAGGTA ACAGTTGTAT AGCTCTCAGT 000560 000561 AAGTGGAGCC CTGAGTGGAG CACGTAAGCA CTTGACTCTA GGCAACATCC TCCTTATCCA TTCAAGAGTT TTCTTCTTTA 000640 000641 GAAAAGTCCC CAGAGAAGTT TCCTGGATTT TTCTCCAATC GTTGTCTGCT CATCTTGTCT TCGTATCCAG TGGAGTTTAG 000720 000721 CTGGAATCAC CATAGGATAT CAATGCTGCC CTCTCTTAGC AGAAGATTGG AGAATTAAGA GAGTATATGC CTTATCTCAC 000800 000801 CTCTCTCTCT CTCCTTTACC AGCTCCATCT CCCCTACCCT TTAGCAATTA CTGCTGTGGA CTCACTGACT CTCTTCATTC 000880 000881 ACACAGATAC AAGAGGGTCA CCACTCACAG AAGAATATGG CTGGCCCTGG GCC |
Predicted Small Protein
Name | NONHSAT005193_smProtein_284:391 |
Length | 36 |
Molecular weight | 4059.5796 |
Aromaticity | 0.0285714285714 |
Instability index | 76.2085714286 |
Isoelectric point | 10.8065795898 |
Runs | 5 |
Runs residual | 0.0382566585956 |
Runs probability | 0.0300830242007 |
Amino acid sequence | MRICTTAKQNSAKNSRQACFENIISHQADNPRRLR |
Secondary structure | LEEEELLLLLLHHHHHHHHHHHHHHHHLLLLLLLL |
PRMN | - |
PiMo | - |