NONHSAT005517
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT005517 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
593 nt |
Genomic location |
chr1-:119561113..119561705 |
Exon number |
1 |
Exons |
119561113..119561705 |
Genome context |
|
Sequence |
000001 GGAGGCATGG CGGGCCAAAA GGCAACTTTT GGGGCATAAA AACAGGAATG CCTATTCTCA TTTAGGGCCC CAGGATCCAG 000080
000081 GCTTGAGGCT GGGGCCTTTG CATGGAGATC ATCCTCTTCT ATCCAGTATT TCACTGTGTC CTGTCCATAT CATTTTTTAG 000160 000161 TAATGGAACC CTCACTCTGA ATTTTAGCAG AGCACATAGC CCAAGGTAGA GACTAAATTT CCCACCCTAC CCCTACAGCA 000240 000241 AGGTATGGGC CTGTAAATTC GTTCTAGCCA ATGGGATATG AGCAAAAGTG ATTTGTGCAA TTTCAAAGTC ACTTCTTTTT 000320 000321 TAAAGCAAAG TGTTCCTCTT TGCCCACACA TCCTGAAACA GCATGTTTGA CCCATTGCTG GAAACCACAA AGGAAAGATG 000400 000401 GACAGAGTCA ACCCCTCAGC CTGGGTTTCC GGACTCAGCA CGCACAGCTA CCTTTCTACC CTGGACTACT CACCTACCTC 000480 000481 TGGACTGTTG TGTGATAAAT CACTTTTATC ATATTTAAGC TATTTTGTCT TGGGATCTCT GGGTTCCAGT ACTTTAGGTA 000560 000561 CTACCCCAAC TAATATACTG ATCTTACTAG ACT |
Predicted Small Protein
Name | NONHSAT005517_smProtein_362:517 |
Length | 52 |
Molecular weight | 5962.7012 |
Aromaticity | 0.137254901961 |
Instability index | 62.0649019608 |
Isoelectric point | 5.30462646484 |
Runs | 7 |
Runs residual | 0.0169869928169 |
Runs probability | 0.0265349382996 |
Amino acid sequence | MFDPLLETTKERWTESTPQPGFPDSARTATFLPWTTHLPLDCCVINHFYHI |
Secondary structure | LLLLLLLLLHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEELLEEEL |
PRMN | - |
PiMo | - |