NONHSAT006152

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT006152

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1144 nt

Genomic location

chr1+:148876040..148902123

Exon number

10

Exons

148876040..148876090,148876290..148876406,148881948..148882049,148882242..148882346,148888061..148888225,148888472..148888598,148889581..148889690,148890197..148890249,148891529..148891741,148902023..148902123

Genome context

Sequence
000001 AAAGGCTTGC TGATAGCGTT CACAGTGACA GCCCGAAAGT ATGATTCTAA GGGCCATGGG TCTGGATTTC CAGGAAAGCG 000080
000081 GAGACCTCGA GGTGCAGGAC TGTCGGGGCG AGGTGGCCGA GGCAGGTCAA AGCTGAAAAG TGGAATCGGA GCTGTTGTAT 000160
000161 TGCCTGGGGT GTCTACTGCA GATATTTCAT CAAATAAGGA TGATGAAGAA AACTCTGTGC TCGATATGGT TGTGTTGTTT 000240
000241 TCTAGCAGTG ACAAATTCAC TTTGAATCAG GATACATGTG TAGTTTGTGG CAGTTTTGGC CAAGGAGCAG AAGGAAGATT 000320
000321 ACTTGCCTGT TCTCAGTGTG GTCAGTGTTA CCATCCATAC TGTGTCAGTA TTAAGGTGTG TTTGGTGCAG ACACTGTGGA 000400
000401 GCAACATCTG CAGGTCTAAG ATGTGAATGG CAGAACAATT ACACACAGTG CGCTCCTTGT GCAAGTTTAT CTTCCTGTCC 000480
000481 AGTCTGCTAT TGAAACTATA GAGAAGAAGA TCTTATTCTG CAATGAAGAC AATGTGATAG ACAGAGTCTT GCTCTGTCGC 000560
000561 CAGGCTGGAG TGCATCGGCG CTATCTCGGC TCACTGCAAA CTCCACCTCC GCCTCCTGGG TTCAAGCGAT TCTCCTGCCT 000640
000641 CAGCCTCCAG AGTAGCAGGG ACTACAGATG GATGCATGCA GTTCGTCAGA ACTTAAATAC TGAGGAAGAA GTGGAAAATG 000720
000721 TAGCAGACAT TGGTTTTGAT TGTAACATGT GCAGACCCTA TATGCCTGCG TCTAATGTGC CTTCCTCAGA CTGCTGTGGA 000800
000801 TCTTCACTTG TAGCACAAAT TGTCACAAAA ACCCACCCAA GACTTATACC CAGGATGGTG TGTGTTTGAC TGAATCAGGG 000880
000881 AAGACTCAGT TACAGAGCCT CACAGTTACA GTTCCAAGAA GAAAACTGTC AAAACCAAAA CTGAAATTGA AGATTATAAA 000960
000961 TCAGAATAGC GTGGCCATCC TTCAGACCCC TCCAGACATC CAATCAGAAC ATTCAAGGGA TGGTGATATG GATGATAGTC 001040
001041 GAGACACAGC CGCTGTCGCT GCCATGTGGC GCGCCGCAGA CTCCCGAGAA CAGCCCTGGC TGTCAGCGGG CACCAGCCGC 001120
001121 TTCCTGTGCC CATCGCGTAG ACTG
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Predicted Small Protein

Name NONHSAT006152_smProtein_671:868
Length 66
Molecular weight 7179.2261
Aromaticity 0.0307692307692
Instability index 58.2215384615
Isoelectric point 5.45330810547
Runs 9
Runs residual 0.0118269230769
Runs probability 0.0480186068422
Amino acid sequence MHAVRQNLNTEEEVENVADIGFDCNMCRPYMPASNVPSSDCCGSSLVAQIVTKTHPRLIP
RMVCV
Secondary structure LLLEELLLLLHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEEELLLLLLLL
EEEEL
PRMN -
PiMo -