NONHSAT006515
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT006515 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
531 nt |
Genomic location |
chr1-:153317501..153320454 |
Exon number |
3 |
Exons |
153317501..153317846,153318578..153318667,153320360..153320454 |
Genome context |
|
Sequence |
000001 GCTGCCATCC ACACTCTCCA GATTGGTGTC CTGGGACCAC GTGGGGATGC TGCCGTGGCT TCTTGTCTTC TCTGCTCTGG 000080
000081 GTATCCAGGC CTGGGGTGAT TCCTCCTGGA ACAAAACACA AGCTAAACAG GTATCAGAGG GGCTCCAGTA CCTATTTGAG 000160 000161 AACATCTCCC AGCTCACTGA AAAAGATGTC TCCACCACGG TCTCTCGCAA GGCATGGGGG GCAGAAGCTG TTGGCTGCAG 000240 000241 TATTCAGCTG ACCACGCCAG TGAATGTCCT TGTTATACAC CATGTCCCTG GACTGGAGTG TCACGACCAG ACAGTCTGCA 000320 000321 GCCAGAGACT GCGGGAACTG CAGGCCCATC ATGTCCACAA CAACAGTGGG TGTGATGTGG CCTACAAGTA AGAGCTGGGT 000400 000401 CTGGGTCCCA CGGCACATGG TCAGTGTTGC TTCCCTGGGA TGCTTCTCCT GTCCCTTCTC ATCCCTTTTC CTCATTTTCT 000480 000481 GGGTTGTGGT CCTATATGTT TTATAATGAA TAAAATATTT AAAACCCCCA T |
Predicted Small Protein
Name | NONHSAT006515_smProtein_263:505 |
Length | 81 |
Molecular weight | 9042.6393 |
Aromaticity | 0.1375 |
Instability index | 44.04125 |
Isoelectric point | 8.90679931641 |
Runs | 17 |
Runs residual | 0.0736842105263 |
Runs probability | 0.0527707638435 |
Amino acid sequence | MSLLYTMSLDWSVTTRQSAARDCGNCRPIMSTTTVGVMWPTSKSWVWVPRHMVSVASLGC FSCPFSSLFLIFWVVVLYVL |
Secondary structure | LEEEEEEELLLLEELHHHHHHHLLLLLLEEEEEEEEEEELLLLLEEEELLLEEEEEELLE EELLLLLEEEEEEEEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLL HHHHHHHHHHHHHHHHHHHL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTToooo TTTTTTTTTTTTTTTTTTTi |