NONHSAT006532
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT006532 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1001 nt |
Genomic location |
chr1-:153603967..153606873 |
Exon number |
5 |
Exons |
153603967..153604301,153604510..153604716,153605512..153605633,153606434..153606586,153606690..153606873 |
Genome context |
|
Sequence |
000001 TTCCGCTCCT CAAGACCGCA CCTCCCCCGG CTCCTTCTCA CTACCGAAAC TCACCGAAGG AAACAGACGC CAGTGCTCCT 000080
000081 CCCGGGGCTG CCACCACGGC TCCGGCAGGC GGGCCGGGGA CCGGCCGAAC CTGAGTTGAC GGTGGAGGGG CTCGGGTTAG 000160 000161 CTAGATGGGC GGTTGGTTAG ATGCCGGCCG CCAGCTCCTG CTCGGTGTCC AAAACAAAAT GGCCGCCACG TCCAGTGCTT 000240 000241 GTCTGACCGG CTAAAATGGC GTCTACGCAA TTACGTCAGG CGTCAGATCC GCGCACGACT AGAGGGCGGG AAAGATTTGA 000320 000321 GCTACGCCTG CGCAGAGatg gagtctcgct gtgtcaccca gactggagtg cagtggtacc atctcggctc actgcaacct 000400 000401 ccgcctccca ggttcaagcg attctcctgc ctcagcctcc tgagtagctg gaattacagT TGAGAAGCTG ATGTCTCCTC 000480 000481 GACTTCCAAC TGGAACCTTG AACCCCCACA TTTCTGGACC TTGAGCATTC CTCAAGTAGG AAGATGTAAT GCACCTTGAC 000560 000561 CTCTTTCTAA ATAAGACACT TCCCCAAATA AGGGGAGTTG AGAGTGAACA GTCTTCACGT CTCCACCCAC TTCCAGATCC 000640 000641 CAGAGGAGAC AGACATCGGA TGGCTGAAGA AATTGTTACA GGCCACTGTG AGAGCAGCCA CAAGCACCAC ATACTCCTGG 000720 000721 AAGTCCACCT CCCCGTCTCC ATTCTCGTCT AGCTCCTTCA TCACCTTGTC CACAGCATCC ACATCCTTCT GGGCCTGTGG 000800 000801 TGGGAGGAGA GGAAGAGGGA GGTGTATAGG GAAGGGTACA GCACTGAGTC AGAGGCAAGG GGGTGGTTGA GGAGCAGGAG 000880 000881 GCAAAGATGA GCGAGAGGAA CTGCATTGAA TTATGGGACT CTTCTAGGCC TCCTCAAAGG TCTTGAGGGC TTCTGTTGCC 000960 000961 TACAGCATAA GCTCTTTCAC CTGGCAGAAT GAATaataat g |
Predicted Small Protein
Name | NONHSAT006532_smProtein_548:751 |
Length | 68 |
Molecular weight | 7687.7595 |
Aromaticity | 0.0149253731343 |
Instability index | 81.1447761194 |
Isoelectric point | 6.41937255859 |
Runs | 9 |
Runs residual | 0.00898648120653 |
Runs probability | 0.0353687020353 |
Amino acid sequence | MHLDLFLNKTLPQIRGVESEQSSRLHPLPDPRGDRHRMAEEIVTGHCESSHKHHILLEVH LPVSILV |
Secondary structure | LLLLHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHLLLLLLLLLEEEEEEL LLLEEEL |
PRMN | - |
PiMo | - |