NONHSAT006998
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT006998 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1031 nt |
Genomic location |
chr1-:159165775..159166793 |
Exon number |
1 |
Exons |
159165775..159166793 |
Genome context |
|
Sequence |
000001 AGCCGTAGGT GCCACTGTCA CTCTTGTTGA GGAAAGGGAA GATCAGGGCA CTCTCCTGGG TCATCTTCAG GGGTGGCACA 000080
000081 CTGCCCTCCT TCTCCCATAG GTACTGCTGG GGGCTGTCGA GGCAGACAAA TCAGAAGAGC TCAGGAGAGC ATAGGCCAGG 000160 000161 GAGCTAAAAG AAAAAAAAAA ATAACTGGGA GCAGGGATGT CAAGGACTGT TTGATGAGGC TGGAGAAATT ATCGGGGCCA 000240 000241 GAGACACTGG AGCTGCTATA CGCCAGGTGG CCTCTTGGGG TTCGTTCTGG GGAAGCTGTA GATCTCCAGA CTTGTATCTT 000320 000321 ACTTTAACTT GGCCTTTGTG GGAAACTCAG GGACTGAGTT AGGGAGTGGC CCCTTCCCAT TTGTGCTGCT TTGCAGAAGA 000400 000401 ACTAATTGCA GGCGGACATT ATTGGACAGT CAGGGAAATG AGAGGCTCAG GTCAGACAAT ACAGAGGAGA TAGGAAGGAG 000480 000481 CTGTTATGTG AAGAAGGCAA TCTGAGAATG TGGAGAGTAA GGAGGAGACC AGGAAATGGA TCTTCTTACA CTGGATTGCC 000560 000561 GCGACCCTCA CAGTGTAGCA ACAGCTTCTG GCCCTCACGA GGATGGGGAG GGTCTGGCCT AATCATCGCA GTTGGTGTGT 000640 000641 CTGTGGAGAA GGAAATGGTA TCAATGAATA CCTCCCCACA CGGCTTAGGA GATTCCCTCA CTTAGTTGCA CACTACAGCT 000720 000721 TCTACCTCTA AATGTTTCCG CAGCTCAAGA AGTGCAACAA AGACCTTCCT TCTCCTACTT CTCATGAACA AGGACCATTA 000800 000801 TTGCTATTGA ATATGTGAGC AACTTCTCTT GCAACCTTGT GTGATAGGAT TCTGGAAGGT CTGTCCTTGG TGGGCCCTAA 000880 000881 GAGATGTCTT AACAGAAAGC TGAGAAGGGA AATGAGTGGT TTACCTGTGC CTAGCAAACC TCCTAGCACA TAGGAAAGAC 000960 000961 CTAATACATA TTTTTTACAG AACAAATAAA GTTGAACTTG TCACATATTG AGCTCACAAA AAAAAAAAAA A |
Predicted Small Protein
Name | NONHSAT006998_smProtein_602:730 |
Length | 43 |
Molecular weight | 5033.7345 |
Aromaticity | 0.166666666667 |
Instability index | 52.6097619048 |
Isoelectric point | 9.38067626953 |
Runs | 9 |
Runs residual | 0.038125376733 |
Runs probability | 0.0227482384345 |
Amino acid sequence | MGRVWPNHRSWCVCGEGNGINEYLPTRLRRFPHLVAHYSFYL |
Secondary structure | LLLELLLLLLEEEELLLLLLLLLLLLHHHLLLLEEEEEEEEL |
PRMN | - |
PiMo | - |