NONHSAT007647
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT007647 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1256 nt |
Genomic location |
chr1+:173638092..173640548 |
Exon number |
2 |
Exons |
173638092..173639171,173640373..173640548 |
Genome context |
|
Sequence |
000001 ACCTGGTCTG CCTTACTAAA TAAGTGTAGA AAAATCTATA AACTTTTCTT TTTAACTATA GAATGTGATT GCTTTCGAGC 000080
000081 CACCcacaat agaaaatcac ataggtcata gcacctaccc cataggctct cacattttgg tagggaagac acaagtaaat 000160 000161 cagcaatgac agagtgagat cagggattca atggaggtag gtagagtgct ttgaaagtaa aaccgtggac atctacattc 000240 000241 aattctgggt ggcggtctca gaaagttttc ccagaagagg tgaaacctcg atagtgaaga gtaggagtct taaaaggagg 000320 000321 aaaaaaggac aatccaggta acgggaagag cataaacaaa gggcaaggag gcaggcgacg cagcctgaag ttgtgataga 000400 000401 ggagtagATC CTAATGTGCC TTTTAAGCCA ACTGATTTTT TTCTTCAAAA AAAAAAAAAA AGTAGTCGCT TAATCAAGTC 000480 000481 CCAGCTCAAG GAGAAGGACC CCAAGGGCAA CCCTGGGCAC ACAGAGTTAA ACAAAGAGAA GGCCTGAGGA ACAGGATACA 000560 000561 GAAAGTGGCA GCGCCGCCAG GTGATCCAGG AGGTCCCGCG AGGGGGCAAC GGACACTTCA GGGCACCAGA GTTTGCTCTT 000640 000641 CGGCCTGAAT TCCCTAGGGA CCTTCTGCGA TCCCTTGCGG CTGCCGGCGG GGTAGGAGAC CGGTGCGCAA AGCTCTGGAC 000720 000721 AGAAGCAGTG TGAGGACGCT GAGATTGAAG CCCACTCCCC TCCAGCCCTG CCCGAGCAGC CTGGAGGGAA GATGTCCGTC 000800 000801 TACCCCATCG CACTCCTCCC CAAGTGCCCA CCCCGGCCCA CAGCGCCAGG ACCCCTAGAC TCACCACACC CGGGCCCCGG 000880 000881 CCTCCTCGGT TACCATAGCA ACGGCGCAAC ACGCGAGGCA GCGCCTCCTC CTGCGCCGCG GTTCCGGCAG CGCGGGAAGG 000960 000961 TTATTCTTGG TTGCAAAGGC GCAGGAAGCC AGAGTGGAAA ACAGCCAGGA ATTATCTATA ATTTCAGTCT CTGGGTGGCG 001040 001041 TGTCGGTTTT TTCTTTGTTT TGTAAATTTT CTGTAATAAG atgtctgtag catgcggctt gtcacatctg caagggagct 001120 001121 gcctggattt gccggggcct gttttctgaa aaatggacca cttaaaaagt acttcttaca ggtgagtggg ctcaaggata 001200 001201 cacattaaga gtcaaaatgg tggagtttaa ctggtatatg accttcttgg gtacat |
Predicted Small Protein
Name | NONHSAT007647_smProtein_791:1075 |
Length | 95 |
Molecular weight | 10060.6939 |
Aromaticity | 0.106382978723 |
Instability index | 50.4436170213 |
Isoelectric point | 9.96063232422 |
Runs | 12 |
Runs residual | 0.00115633672525 |
Runs probability | 0.0515368309487 |
Amino acid sequence | MSVYPIALLPKCPPRPTAPGPLDSPHPGPGLLGYHSNGATREAAPPPAPRFRQRGKVILG CKGAGSQSGKQPGIIYNFSLWVACRFFLCFVNFL |
Secondary structure | LLEEEELLLLLLLLLLLLLLLLLLLLLLLLEEEELLLLLLLLLLLLLLLLLLLLLEEEEE ELLLLLLLLLLLEEEEELLHHHHHEEEEEEELLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHH |
PiMo | i??????????????????????????????????????????????????????????? ?????????????????????????????????? |