NONHSAT007816
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT007816 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
718 nt |
Genomic location |
chr1+:178090096..178269190 |
Exon number |
6 |
Exons |
178090096..178090222,178092191..178092317,178092854..178092950,178094462..178094636,178252699..178252826,178269127..178269190 |
Genome context |
|
Sequence |
000001 cctgtgtggt ggcccagttc ctaacaggaa ccagggTATG GGGACCCCTG TTTTAGAGAA TCAGTTTCAG GGTCCCAGTA 000080
000081 ATTTCCTTTT CCTCAAGTTT TCATACTACA TTTTCAAGTT TTTCCAGatc atctatctaa aaatcacctg gaatgcttgt 000160 000161 taaaaattcg gatccttgga cccttccttc acccatctct caccaatcag aatatctggg agctgcctag gaattgcatt 000240 000241 taacaggcac ccaggcggaa tgcagtggta cagccatggc tcattgcagc ctcaacctcc tgggctcaat tgatcctcct 000320 000321 gcctcagcct tctgagtagc tgggactaca gGTCTTTGGA ATGGCATCTC TTCATATGCA ACGTAGAATA TATGCTTACt 000400 000401 gtattagtcc actttgtgtt gctgtgaagg aatacctgag gctgggtaat ttataaagag aagaagttta attgtctcag 000480 000481 agttcttcag gctgtacagg aaatgtggtg ccggcatctg cttctgATGT GAAAGGACCA CCCACCCACC GTCTGTCTTG 000560 000561 TGGTCAGTCA CCCTACACCG AGACAACAAC GTGGGAGCGG AAGTATTGCA TCCTCACAGA CAGCCAGTTG GTATTGCTCA 000640 000641 ACAAGGAGAA GGAGATACCT GTGGAAGGGG GACAGGAGCA GCAGACAGAT TCCACCAAAG GGCGATGCCT GAGGAGAA |
Predicted Small Protein
Name | NONHSAT007816_smProtein_152:229 |
Length | 26 |
Molecular weight | 2742.0664 |
Aromaticity | 0.08 |
Instability index | 56.152 |
Isoelectric point | 5.30267333984 |
Runs | 5 |
Runs residual | 0.00830188679245 |
Runs probability | 0.0122416534181 |
Amino acid sequence | MLVKNSDPWTLPSPISHQSEYLGAA |
Secondary structure | LEELLLLLLLLLLLLLLHHHHLLLL |
PRMN | - |
PiMo | - |