NONHSAT009495
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT009495 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1870 nt |
Genomic location |
chr1-:217600340..217602209 |
Exon number |
1 |
Exons |
217600340..217602209 |
Genome context |
|
Sequence |
000001 TTATGAGTGC TCTTTATTGT TGCTGTTCTG GACAGGTACA AATCTTCTGA AGCAACTTCT GTGGGATGTT AACTTAGCTT 000080
000081 CTCTAACACC TAAAAAAATT CTTCTTTGTA TTTTCAGCTA ATAGAAGACA GTTCTTCTTC ATCTTGACAC CTAGAGCCCT 000160 000161 CTATGTGATT CACAGAGGAC TTAAAATACT TCTTACTCTG TTGAAGTGTT TAATTGTACA GAATATATGT ACTCTACAGT 000240 000241 ATATGTGAAT CAGCACTCAA AGCAGAGAAG TGATAACATC CCAAGCTTCC CCCATACTTC TACTGACATG CCCTCAGTCT 000320 000321 TTAAGAAAAC TCAGTACAGA CCTGATGTTC TGGTTGTACC TGAACTTAAT TGGAGAAACA AACGCAATTA AAATACGAAT 000400 000401 TTTTTAGTGC AAATCAAATG TCTTTCACCA TCTGAAGCCC ACTAATTTGT CTTTTATATA TAGTTAATTT TTTGCCAGTT 000480 000481 ACAACGTCCA TAGAACCCCA AGATTTAGAA TGTATCATTT ATATTTCCTC TAAAAGGTAG TAAGAGATTT CTTCTGCTGT 000560 000561 TTTGTGAAGC CACTCTTCTA CAGTATCTGT AGCCTTATAG CAAATTAATT GGTTGTACTA AAAATTTTAG AGACTGCATA 000640 000641 GGTCTCCCTT TTCTATCCTA ATTACCTGCA ATAGCCTAGA GACGCTGAGC ATGATTACAT TAGCAACTTG ACTGTTTAAA 000720 000721 AAATTTGTTA TACTTGATAA TGACCAGACT GTGTGCTGGA GTCATTTGTT TCCTTCTTTT CTGCTCCCCG AATACACTAT 000800 000801 TTAATTTGGT TACTTTTATT TTTAAACTAT ATGGCACCCT TTTAAATAAA CATTCATTGC TAATTAAAAT CTGCCAATAA 000880 000881 ATTGGTCTCA GCATTTAAAT ACCATATATT TTATAACTCA TACTGTGGCT ATCAAACAGA AGTTAACACA GTAGGGGTAA 000960 000961 AGATATACAT AATGTGTACC TATAGGTGTA TTTATAATGC CTGTGTGCAG TATACAGACA TAATTACAAA ATACTGCATT 001040 001041 TTATTAATGT TTATTTTAAT ATTGAGAATT GGCATTCTTG TAAATTGAAC TGACAATTGC TTCTATTCAG TACACTTTAT 001120 001121 TTTGAGCAGA TATTTCCGAA AAGAGAAAAA ATCACTGTTG ACATGCTTTT TAAAACTGTT TTCACCTGTA TTTTGTCTTT 001200 001201 CAAAAAGAAA AGTGATCTAA GTTGGCATTG TAAAGAAATT GTTAGCAAAG AATATTTTTT TTTATTTTTT CTTTTGGTAG 001280 001281 AAAGTCATGT TAATAGTACA ACAAAGAATC AAAGAATAAA ACATAATGTT TAAGAACATT ATTTATAAGT AGTCATTGTC 001360 001361 TTTGTGCTTT AAATGTTTCC CTTTTACCTT AGAGTTATTT TTTAAAAGTT GAAAGTACTT TAAAAATTGG TTTAAATGAG 001440 001441 TACCCATTGA CAATTATCAT TTAATAGTGC AGTTAAGTTC AGCGAAAAAT TTCAATATCT CAAAAAAATT AGAGAAAAAT 001520 001521 ATTGGTAAAT GTATTTGATT CACAAATGTA TTCATAGCCG ATTGTGAGCT GCTCTACCAC ATTTTCCTGT TTTTATTGTT 001600 001601 TCTGTGAAGC TTGATTAGAC TAACTTGCTT AAGGTCTCTT TCCCCTCAAG GATTCTGTGA TTCTAATGTA ACAAGGTACA 001680 001681 CACGCTCTCT CTGACCACTT AAAGTATCAG AGTTCAAATC TGTTACAATC ACTCCATTTC CTTTTGGAAA GTTGTGCCTC 001760 001761 TCATAAAGCT GCTTGGACAT TTTAAGTGTT TTGTAATATG CATTGAAGTG TTGAGTTTTG TTTGCTGTAA GAGGCATTTC 001840 001841 ACTATGTTGA TTAAACTTAT CTTTTCTCCC |
Predicted Small Protein
Name | NONHSAT009495_smProtein_971:1087 |
Length | 39 |
Molecular weight | 4505.5627 |
Aromaticity | 0.131578947368 |
Instability index | 42.3342105263 |
Isoelectric point | 8.45867919922 |
Runs | 6 |
Runs residual | 0.014716066482 |
Runs probability | 0.0 |
Amino acid sequence | MCTYRCIYNACVQYTDIITKYCILLMFILILRIGILVN |
Secondary structure | LLLEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHLLEEL |
PRMN | LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLL |
PiMo | iiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTooo |