NONHSAT009852
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT009852 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1391 nt |
Genomic location |
chr1+:225965515..225978160 |
Exon number |
3 |
Exons |
225965515..225965636,225971002..225971070,225976961..225978160 |
Genome context |
|
Sequence |
000001 GGTGCGAGGA GGCGCCGCCA TCTTGGGGCT GCTGGGACTC GCGTCGGTTG GCGACTCCCG GACGTAGGTA GTTTGTTGGG 000080
000081 CCGGGTTCTG AGGCCTTGCT TCTCTTTACT TTTCCACTCT AGGCACGTGT GGTTCTCAAA TATAGGCATT CTGATGGGAA 000160 000161 CTTGTGTGTT AAAGTAACAG ATGATTTAGT TACCAAGCTC AAGATGTAAA GAAGATTGAG AAATTCCACA GTCAACTAAT 000240 000241 GCGACTTATG GTAGCCAAGG AAGCCCGCAA TGTTACCATG GAAACTGAGT GAATGGTTTG AAATGAAGAC TTTGTCGTGT 000320 000321 ACTTAGGAAG TAAATATCTT TTGAATTAGA GAAAGTGTTG GGACAGAAAG TACTTTATGT AACTAAGTGG GCTGTTCAGA 000400 000401 AGCTTAGAGG TCATTTTTTG TAATTTTCTT TTTAATTACT TTAGAGAGCT AGGGATGCAA ATGTTTTCAG TTAGAAAGCC 000480 000481 TTTATTTACT TTTGGAAATT GAACAAGAAA TGCATCTGTC TTAGAAACTG GAGATTATTT GATGTTAGGT AAAACATGTA 000560 000561 ATTGTTTCTC TGGCAAATTT GTATCAGTAA TTTGAAAATG AGATATTAGG AAAAACCAAT TCTTCTTAAA TTTAGTTCAT 000640 000641 CTTTCTTTAA AAGAACATTA AATGTAACCA TTTTGTCAGA TCCATGTATT TTGGAGCATA AAATGTATGC TGTTGTGACC 000720 000721 AATAAATATA AAATATGGTA ATTGGAATTA ACTCCACACC ATAGTATGCA TTGTTATACA TACTGTGTAC CTAATTATGT 000800 000801 ATAGCAGTGT AGTCTCAATT ATATCTGAAA GTAATTGTGA CTAACAAGTA TGCTTTGCCT TATTTCCACA TTTAAACTAC 000880 000881 CTGTTAATAT AAGGGATTTG TAGTATCAGC TTGTTGAGCA ATGACTTTGA ATCTAGTTTT CAGTGATCAG AAGCAGCAGT 000960 000961 TATTTGAGTG TATGAATGGA ATGATGATCA CTGTGCTATA ATGTACTGAA ACCACCATAT TACAGAAATA TTTACTACAT 001040 001041 ATTTTCCATC TGTAGTTTCT CAGAAGGGCT ATGGATTAGT TTGAACTGTC AAATCCTTGC ATACTTCTGT GACACCCCTG 001120 001121 CCCATTTTCT GTCTTTAATT AACCAAGGTG TTAGGTGTGA CTGTCACAAC TGTTATGTTT TCCAGTAAAC TAGAAGTACG 001200 001201 ATATTTGATA ATTATATTTG TATTTCACCA CCTAAATGTA ATGTTGATTC CTCAAGAATG AAATGAAGGC ACTACATTGA 001280 001281 AATATGTTTT GTATAAATTT GTCATGTTGA ACAGCATTTT AGCATGGTAA GTTCCCTTAG CTATATGAAT TTTGGCATGT 001360 001361 TTCAGAGAGA TCAGtaaata aaatattaga t |
Predicted Small Protein
Name | NONHSAT009852_smProtein_920:1000 |
Length | 27 |
Molecular weight | 3035.6427 |
Aromaticity | 0.0769230769231 |
Instability index | 47.5576923077 |
Isoelectric point | 4.36907958984 |
Runs | 6 |
Runs residual | 0.0214669051878 |
Runs probability | 0.0249808632162 |
Amino acid sequence | MTLNLVFSDQKQQLFECMNGMMITVL |
Secondary structure | LEEEEELLHHHHHHHHHHHHHHHEEL |
PRMN | - |
PiMo | - |