NONHSAT010376
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT010376 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
866 nt |
Genomic location |
chr1-:235901290..235907332 |
Exon number |
3 |
Exons |
235901290..235901894,235904722..235904928,235907279..235907332 |
Genome context |
|
Sequence |
000001 CCATTTCAGA AAGAAATTTT TACATATCTG GTAGAAGGAT TCAAAGTATC TATTGGTTCA AGTAAAGCCA GTGGTTCCAA 000080
000081 GCAGCAATGG ACTAAAATTC TGTGGTCTTG TAAGGAGACC TTCCGAATGC AGCTTGGGAG ACTACTAGTG CATATTTTGT 000160 000161 CGCCAGCCCA CGCTGCACAA GAGAGAAAGC AAATTTTTGA AATAGTTCAT GAACCAAATC ATCAGGAAAT ACTACGAGAC 000240 000241 TGTCTCAGCC CATCCCTACA AGCACACTAG AATCTCCATG TTCCCCAAGG ACTCACCCAT GACAGCTTAA TGTGTGAACT 000320 000321 CCCAGCCTTT CCCCCATTGG GTAACGGAAT TGGGCTGAGT CCAGATTGCA ACCACTTCCA ATAACATGGT TTTTGGGAAA 000400 000401 GCCATTATCT TCCAAGCCAC TATAGGTCAA AGATATCCAC TGGATTTGAA ACAATAAGCA ACTTGCAGTT CGGGCTGTAT 000480 000481 TTTACAACAT TAGGAATGAT GAATTTAAAG ATGTTCACAT TACACTGGAC CAAATTAAGA TGGCTTTCTC CCTCTTGCGA 000560 000561 TGTGCCTCAG CCGTGATAGT GACCAGCTTG GAGTTTACAG TTACAGTATA GTCTTTGCCA GAGACAATCT TTGGTGTTCT 000640 000641 AAGGAAAAGG CTGCCATGGT GGAGATCCAT CATCTCGCCC TTCAATTTGT CTTCCATGAC ATCAACAAGA GCAAGTTCGC 000720 000721 CTGCCAAGTC CTTCATTAAG ATACCGATGG CACAGGCCAT GCCAAGAGCA CCAACCCCAA CAACTGTAAT CTTATTCTGG 000800 000801 AGGATCTGTT CTTCCTTTAG AAGACTGTGA ATAAGCTGAT CCTTGAGCGT ATACTTGAGA GTATAT |
Predicted Small Protein
Name | NONHSAT010376_smProtein_695:829 |
Length | 45 |
Molecular weight | 4954.9052 |
Aromaticity | 0.0909090909091 |
Instability index | 58.8590909091 |
Isoelectric point | 12.1810913086 |
Runs | 6 |
Runs residual | 0.0267379679144 |
Runs probability | 0.0351086380498 |
Amino acid sequence | MTSTRASSPAKSFIKIPMAQAMPRAPTPTTVILFWRICSSFRRL |
Secondary structure | LLLLLLLLLLLLLEELLLLLLLLLLLLLLEEEEEEHHHHHHLLL |
PRMN | - |
PiMo | - |