NONHSAT010616

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT010616

Source

NONCODE4.0

Same with

,

Classification

antisense,sense

Length

525 nt

Genomic location

chr1+:243651117..243663391

Exon number

3

Exons

243651117..243651180,243652316..243652442,243663058..243663391

Genome context

Sequence
000001 GGCACAGGTA GGGCGCCCCG CAGACCCGGA CAACGCTGGG TGTGGCTGAA AACAGGGAGT CATGGCTAAG GCAGCTGGAT 000080
000081 AAGCACAGCC AGGCCACAGC CCAGCAGCTG GTGCAGCTCC TCAGCAAGCA GAACCAGCTT CTCCTGGAGA GGCAGAGCCT 000160
000161 GTCGGAAGAG GTGGACCGGC TGCGGACCCA GTTACCCAGC ATGCCACAAT CTGATTGCTG ACCTGGATGG AACAGAGTGA 000240
000241 AATAAATGAT TTACAAAGAG ATATTTACAT TCATCTGGTT TAGACTTAAT ATGCCACAAC GCACCACGAC CTTCCCAGGG 000320
000321 TGACACCGCC TCAGCCTGCA GTGGGGCTGG TCCTCATCAA CGCGGGCGCT GTCCCCGCAC GCAGTCGGGC TGGAGCTGGA 000400
000401 GTCTGACTCT AGCTGAGCAG AGCTCCTGGT GTATGTTTTC AGAAATGGCT TGAAGTTATG TGTTTAAATC TGCTCATTCG 000480
000481 TATGCTAGGT TATACATATG ATTTTCAATA AATGAACTTT TTAAA
[back to top]

Predicted Small Protein

Name NONHSAT010616_smProtein_245:322
Length 26
Molecular weight 3138.7028
Aromaticity 0.24
Instability index 60.16
Isoelectric point 9.98431396484
Runs 5
Runs residual 0.00830188679245
Runs probability 0.0285108638051
Amino acid sequence MIYKEIFTFIWFRLNMPQRTTTFPG
Secondary structure LEEHHHHHEEELLLLLLLLLLLLLL
PRMN -
PiMo -