NONHSAT011465
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT011465 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2412 nt |
Genomic location |
chr10+:12875133..12877545 |
Exon number |
1 |
Exons |
12875133..12877545 |
Genome context |
|
Sequence |
000001 TGGGCTCATA GGAAATATCT GTAGTAGGAT GAAAGGAATC TGGCCTAGGG AGCCCCGGAC TCGGTTTACC TACCCCGTAC 000080
000081 TCATCCCACT CATCTGTCTA CCCTAGTGTC CATCATGCCC TGGATGAATC GTAGGTGGGA GGGACAGAAG CCGAGAACAC 000160 000161 CAGGCACACG GGGTGGGGGG AATGGGGGGA GCCCAGGTGA TCCCCTTTGG AAAGTGGATT GATCCTCTCC CCTGTGGAAT 000240 000241 GACAGCTTAA CCTGATTAAC CCACTGGGGC TTGCTATTTT ATGAGCATTT TTAAACAGAA AGGAAAGATG ATATCCCAGT 000320 000321 GCAGGTAGAC TTTATTTTTG AAAGCATCGT GGCCCCTCAC CTCTCCCTCT CCCCCAGAAC CTTGGCCAGA ATTGAGTCTT 000400 000401 CGCGTTGGGG AGGCCACGCT GGAACCATTG CTCTAGGGCT GAAGGTGGAA GTAGGGCCAC TGCCGCAGCT TCAGCCAGAG 000480 000481 CCCTCGCTGC TTCGCAGAAT TTAACAAGCA CACGACTGGG ATTCCTTTGG ATATGAGAAA GGAAGGCAAG TGCGGGCAAA 000560 000561 GGGAAGCTCC TCCCGTTTTT CATAAACAGA AGTAAGATGT CCTCTTTCCC AGGTTTGCAC AATCACTTCT GGCAAATTAA 000640 000641 TTGAAGGTCC TTGAATTCAG CCAGTGCACG AAACCTTTGC ATGTTCTTCT GAAACTGTAC TTCTTCCCTA TTCTGTCTAC 000720 000721 CCACACTCTG CGAACTTTGC CTTTTCCTTA AACACATTCC AGACCAAACA CTGTTCAGTT TGTTAAAAAA AAAAAAAAAA 000800 000801 AAAAAAGATG TATATACCTG TATGTGATCC ACCACCCTTT TGAGGGGCAC CTGGTCCTCG GTTGGGGCTG CAGGTGTGCC 000880 000881 TGACATTTGC AAAAGATATT CCAGTCTTTC GATGTTCAGA ATTGAAAATG TGGAGATAGA AAAGCTCAAA CAGACTCCTA 000960 000961 AAAGGAGGGT TTCTTTCCTG AAGACTCCAA GAAAATGAGT GTGCAGATGA GTTAGCTTGA CAACCTCAAC TCTGGGGAGC 001040 001041 AGGCAGGCGG TCTGAGGAAG ATAAGGGCCC ACGCCCCACT CACCTGGCAC CTGTTCGGTG GTCCCGGGGC ATCATGGTCT 001120 001121 GCAGCTCTGG GCCCCCAGCC CCACTGTGAA GTCAGTCCTG CATGCTGGCC GAGGCCCGGC CACCTCCCGA TGCCTCCAGA 001200 001201 GTCAGTGGGA AGGAGTCAGC CCTTCCCAGA CTTCCCCGCC ACCTCCAGCA GGAGCAGCTC AGTTTGTGGC TCTGGGAGCT 001280 001281 CCGCTTTTGC AAACCCAAAA AGGCTGTGCA TTTGGAAGCC AAACGCTCAG CATGCGGCTG CCGAGTCTGG TTTTGTGGAC 001360 001361 AAAGCAAACT GTGGAATGGC TTCTCGGTGT CTGTATAAAG GGACAAACGG TTGCATTCAC CCTTTGTACT ATAACACCGC 001440 001441 TTCTGCATTC GCCATATCCG TTTTTTAACC TTTTTGTCTC CGGGGAACTT CTCATTCGAT TATTATGTCT TCTGATGATT 001520 001521 TGCCATGTTA TTTTAAAGGT GATTTTATTT TCTTATGGAC AGGAAAAAAG AAAATGAGGA GGAGTTGGTT TTACTCTTAG 001600 001601 AGATAAGACT TCAGCAGGGG CTCAGAAACC CCAAACTCTA GTTAAATTGC TTCTCGGAGG AAAATCTTAA TCTAGACAGA 001680 001681 TTCAGATTCC CAGGCTCTCC TGGAAGCCCT GCACTTCAGG GCACAGGGGC CCTGGGACGT GGTTGGCAGC CAGGCTGCGA 001760 001761 GAGAGCTAAA AAGGAACAAG AACATCAGCT CGGATGTTTG TCTCTCAGCC CTGACACCTG CCACTCTCCT TCCCGGGGCA 001840 001841 CTTGGCCCTA TCAGAGGGAC ATGAAATGCT GTCCGAATGG TGGCAGAAAT GCAGCGACAT TGCATGCAGC AGAGTCTTTG 001920 001921 CTTCGAAAGA TGGGGCGCCA TGTTTCAGAG AACATTTATC TTAGTCCCAC GTTCAGGTGA GAAGACCTCA AAGGTACCCT 002000 002001 CTGTCCAGAA TAAACATTGG AACAATCTCT CAATTGGCTT TTGTCACTAC ACATAATGTA ATCTCCCTTC TTTCAGCTCC 002080 002081 CCCAACAGTG AGCATGCTTC CCAAAAAATT ACAACATCAA AACCAGGAAT GTCCCCGCAT CTACTATTAC CAGGCTTGCA 002160 002161 ATTGGTTCAA TTTTCCCATA AAAACATGTT TGTCCAAAAG AAGGGAAACT GTGAATTTAT TCCATGCATG TAATAAACTC 002240 002241 TGCAAGAAGT TTAACCCACA TAGGTTTGCG GCACTGCAAA ATTGTTCATG GGTCTATGTA GCAAATGATT CTCTGCCTTG 002320 002321 ACAATCATGT ATACATATCA AGATTTCTAT CATAATGATA ATGAGATTGA TGACTTCCTG TTTTCCTCCA ATAAAGACAA 002400 002401 TTAATCACCT TC |
Predicted Small Protein
Name | NONHSAT011465_smProtein_1331:1576 |
Length | 82 |
Molecular weight | 9336.3618 |
Aromaticity | 0.111111111111 |
Instability index | 42.0950617284 |
Isoelectric point | 9.33941650391 |
Runs | 12 |
Runs residual | 0.00596844084703 |
Runs probability | 0.0378245892952 |
Amino acid sequence | MRLPSLVLWTKQTVEWLLGVCIKGQTVAFTLCTITPLLHSPYPFFNLFVSGELLIRLLCL LMICHVILKVILFSYGQEKRK |
Secondary structure | LLLLLLLLHHHHHHHHHHHHHHLLLEEEEEEEEELLLLLLLLLLEEEEELHHHHHHHHHH HHHHHHHHHHHEELLLLEELL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHH HHHHHHHHHHLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTT TTTTTTTTTTiiiiiiiiiii |