NONHSAT011465

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT011465

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2412 nt

Genomic location

chr10+:12875133..12877545

Exon number

1

Exons

12875133..12877545

Genome context

Sequence
000001 TGGGCTCATA GGAAATATCT GTAGTAGGAT GAAAGGAATC TGGCCTAGGG AGCCCCGGAC TCGGTTTACC TACCCCGTAC 000080
000081 TCATCCCACT CATCTGTCTA CCCTAGTGTC CATCATGCCC TGGATGAATC GTAGGTGGGA GGGACAGAAG CCGAGAACAC 000160
000161 CAGGCACACG GGGTGGGGGG AATGGGGGGA GCCCAGGTGA TCCCCTTTGG AAAGTGGATT GATCCTCTCC CCTGTGGAAT 000240
000241 GACAGCTTAA CCTGATTAAC CCACTGGGGC TTGCTATTTT ATGAGCATTT TTAAACAGAA AGGAAAGATG ATATCCCAGT 000320
000321 GCAGGTAGAC TTTATTTTTG AAAGCATCGT GGCCCCTCAC CTCTCCCTCT CCCCCAGAAC CTTGGCCAGA ATTGAGTCTT 000400
000401 CGCGTTGGGG AGGCCACGCT GGAACCATTG CTCTAGGGCT GAAGGTGGAA GTAGGGCCAC TGCCGCAGCT TCAGCCAGAG 000480
000481 CCCTCGCTGC TTCGCAGAAT TTAACAAGCA CACGACTGGG ATTCCTTTGG ATATGAGAAA GGAAGGCAAG TGCGGGCAAA 000560
000561 GGGAAGCTCC TCCCGTTTTT CATAAACAGA AGTAAGATGT CCTCTTTCCC AGGTTTGCAC AATCACTTCT GGCAAATTAA 000640
000641 TTGAAGGTCC TTGAATTCAG CCAGTGCACG AAACCTTTGC ATGTTCTTCT GAAACTGTAC TTCTTCCCTA TTCTGTCTAC 000720
000721 CCACACTCTG CGAACTTTGC CTTTTCCTTA AACACATTCC AGACCAAACA CTGTTCAGTT TGTTAAAAAA AAAAAAAAAA 000800
000801 AAAAAAGATG TATATACCTG TATGTGATCC ACCACCCTTT TGAGGGGCAC CTGGTCCTCG GTTGGGGCTG CAGGTGTGCC 000880
000881 TGACATTTGC AAAAGATATT CCAGTCTTTC GATGTTCAGA ATTGAAAATG TGGAGATAGA AAAGCTCAAA CAGACTCCTA 000960
000961 AAAGGAGGGT TTCTTTCCTG AAGACTCCAA GAAAATGAGT GTGCAGATGA GTTAGCTTGA CAACCTCAAC TCTGGGGAGC 001040
001041 AGGCAGGCGG TCTGAGGAAG ATAAGGGCCC ACGCCCCACT CACCTGGCAC CTGTTCGGTG GTCCCGGGGC ATCATGGTCT 001120
001121 GCAGCTCTGG GCCCCCAGCC CCACTGTGAA GTCAGTCCTG CATGCTGGCC GAGGCCCGGC CACCTCCCGA TGCCTCCAGA 001200
001201 GTCAGTGGGA AGGAGTCAGC CCTTCCCAGA CTTCCCCGCC ACCTCCAGCA GGAGCAGCTC AGTTTGTGGC TCTGGGAGCT 001280
001281 CCGCTTTTGC AAACCCAAAA AGGCTGTGCA TTTGGAAGCC AAACGCTCAG CATGCGGCTG CCGAGTCTGG TTTTGTGGAC 001360
001361 AAAGCAAACT GTGGAATGGC TTCTCGGTGT CTGTATAAAG GGACAAACGG TTGCATTCAC CCTTTGTACT ATAACACCGC 001440
001441 TTCTGCATTC GCCATATCCG TTTTTTAACC TTTTTGTCTC CGGGGAACTT CTCATTCGAT TATTATGTCT TCTGATGATT 001520
001521 TGCCATGTTA TTTTAAAGGT GATTTTATTT TCTTATGGAC AGGAAAAAAG AAAATGAGGA GGAGTTGGTT TTACTCTTAG 001600
001601 AGATAAGACT TCAGCAGGGG CTCAGAAACC CCAAACTCTA GTTAAATTGC TTCTCGGAGG AAAATCTTAA TCTAGACAGA 001680
001681 TTCAGATTCC CAGGCTCTCC TGGAAGCCCT GCACTTCAGG GCACAGGGGC CCTGGGACGT GGTTGGCAGC CAGGCTGCGA 001760
001761 GAGAGCTAAA AAGGAACAAG AACATCAGCT CGGATGTTTG TCTCTCAGCC CTGACACCTG CCACTCTCCT TCCCGGGGCA 001840
001841 CTTGGCCCTA TCAGAGGGAC ATGAAATGCT GTCCGAATGG TGGCAGAAAT GCAGCGACAT TGCATGCAGC AGAGTCTTTG 001920
001921 CTTCGAAAGA TGGGGCGCCA TGTTTCAGAG AACATTTATC TTAGTCCCAC GTTCAGGTGA GAAGACCTCA AAGGTACCCT 002000
002001 CTGTCCAGAA TAAACATTGG AACAATCTCT CAATTGGCTT TTGTCACTAC ACATAATGTA ATCTCCCTTC TTTCAGCTCC 002080
002081 CCCAACAGTG AGCATGCTTC CCAAAAAATT ACAACATCAA AACCAGGAAT GTCCCCGCAT CTACTATTAC CAGGCTTGCA 002160
002161 ATTGGTTCAA TTTTCCCATA AAAACATGTT TGTCCAAAAG AAGGGAAACT GTGAATTTAT TCCATGCATG TAATAAACTC 002240
002241 TGCAAGAAGT TTAACCCACA TAGGTTTGCG GCACTGCAAA ATTGTTCATG GGTCTATGTA GCAAATGATT CTCTGCCTTG 002320
002321 ACAATCATGT ATACATATCA AGATTTCTAT CATAATGATA ATGAGATTGA TGACTTCCTG TTTTCCTCCA ATAAAGACAA 002400
002401 TTAATCACCT TC
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Predicted Small Protein

Name NONHSAT011465_smProtein_1331:1576
Length 82
Molecular weight 9336.3618
Aromaticity 0.111111111111
Instability index 42.0950617284
Isoelectric point 9.33941650391
Runs 12
Runs residual 0.00596844084703
Runs probability 0.0378245892952
Amino acid sequence MRLPSLVLWTKQTVEWLLGVCIKGQTVAFTLCTITPLLHSPYPFFNLFVSGELLIRLLCL
LMICHVILKVILFSYGQEKRK
Secondary structure LLLLLLLLHHHHHHHHHHHHHHLLLEEEEEEEEELLLLLLLLLLEEEEELHHHHHHHHHH
HHHHHHHHHHHEELLLLEELL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHH
HHHHHHHHHHLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTT
TTTTTTTTTTiiiiiiiiiii